Gene Information

Name : nifS (Clst_0879)
Accession : YP_007678971.1
Strain : Clostridium stercorarium DSM 8532
Genome accession: NC_020887
Putative virulence/resistance : Unknown
Product : NifS
Function : -
COG functional category : -
COG ID : -
EC number : 2.8.1.7
Position : 978388 - 979578 bp
Length : 1191 bp
Strand : +
Note : cysteine desulfurase; COG:1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; KO:K04487 cysteine desulfurase

DNA sequence :
ATGGATAAACATATAGTTTATGTCGATCATGCGGCTACCACTTATGTAAAACCCGAAGTATTTGAAGCGATGAAGCCTTA
TTTTACCGAATATTTTGGGAATCCGTCATCCATATATTCTTTAGGCAGGGAAAGCAAAAAAGCCATAGAAAATGCAAGGG
GAGTAATAGCCGAATGCCTTGGTGCCCAGCCTTCTGAGATTTATTTTACAGGTTCAGGCACCGAAGCTGATAACTGGGCA
ATTAAAGGCGTTGCATATGCAAACAGGAAAAAGGGTAAACATTTAATCACTTCAGCAATAGAACATCATGCGGTGCTTCA
TGCCTTTGATTATTTGAAGAAAGAAGGCTTTGAAGTTACCTATCTCCCCGTCGATGAAAGAGGGTTTGTAAACCCGAAGG
ATCTTGCTGAAGCGATAAGACCCGATACCACTCTTGTAAGCATAATGATGGCAAATAACGAAATCGGAACCATACAGCCC
ATAAAAGAGCTTGCCGCCATAGCAAAGGAAAAGGGTGTGATTTTCCATACCGATGCCGTGCAGGCAATGGGGAATCTGGA
TGTTAAGGTTAATGATTTGAATGTGGATTTGCTGTCGATGTCGGCTCATAAATTTTATGGCCCGAAAGGTGTAGGAGCTC
TGTATGTAAGAAAAGGGGTACGTATCGACAGTTTTGTTCATGGCGGGGCTCAGGAAAGAAACAAGCGTGCAGGCACCGAA
AACGTTCCCGGCATAGTGGGTATGGCTGCAGCCCTTAAACTTGCCTATGAAAATCTTGAAGAATATAACAAACACCTGCG
CAAGCTCAGCAATAAGCTGATAGACAGCGTTATGGAACGGATTCCTTATGTTCGGTTAAACGGGGACAGAGAAAACAGGC
TCCCCGGGAATGTGAATTTTTCCTTCCAGTTTATTGAAGGGGAATCCCTTCTGTTAATGCTTGATATGAAGGGAATCCAG
GCTTCAAGCGGTTCCGCGTGCACGTCGGGTTCACTGGATCCGTCTCACGTGCTGCTGGCTATAGGTTTACCCCATGAAAT
AGCTCACGGCTCATTGAGAATTACTTTCGGTGAGGATAACACCGAAGAACAGGTGGATTATATAGTAGACAACCTCGTGG
AGATAGTGGAGAGACTGAGACAGATGTCTCCGCTATATGAGGATTTTGTAAAAAAAGGACAAAAAGCTTAA

Protein sequence :
MDKHIVYVDHAATTYVKPEVFEAMKPYFTEYFGNPSSIYSLGRESKKAIENARGVIAECLGAQPSEIYFTGSGTEADNWA
IKGVAYANRKKGKHLITSAIEHHAVLHAFDYLKKEGFEVTYLPVDERGFVNPKDLAEAIRPDTTLVSIMMANNEIGTIQP
IKELAAIAKEKGVIFHTDAVQAMGNLDVKVNDLNVDLLSMSAHKFYGPKGVGALYVRKGVRIDSFVHGGAQERNKRAGTE
NVPGIVGMAAALKLAYENLEEYNKHLRKLSNKLIDSVMERIPYVRLNGDRENRLPGNVNFSFQFIEGESLLLMLDMKGIQ
ASSGSACTSGSLDPSHVLLAIGLPHEIAHGSLRITFGEDNTEEQVDYIVDNLVEIVERLRQMSPLYEDFVKKGQKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 4e-69 45