Gene Information

Name : SHJGH_1017 (SHJGH_1017)
Accession : YP_007690017.1
Strain : Streptomyces hygroscopicus TL01
Genome accession: NC_020895
Putative virulence/resistance : Resistance
Product : ABC transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1190207 - 1190890 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCTGACCCTGACCGGCATCACCCTCACCTACCCCGACGGCGACACCCGCCTGACCGCTCTCGACCAGGTCAGCCT
GAAGGTGCCCCAGGGCAGCCTGACCGCCGTGGTCGGCCCCTCCGGCTCCGGCAAGTCCAGCCTCCTCGCGGTCGCCGCCA
CCCTGATCACCCCCGACACCGGCACCGTCACCATCGACGGCCAGAGCACCATCGGCCTCACCCCCGGCGCACTGACGAAA
CTGCGCCGCCACAAGATCGGCATCGTCTTCCAGCAGCCCAACCTGCTGCCCTCCCTCACCGCCGCCGAACAACTCCAGGT
CATGGCCCAGATCGACGGGCGCAAACCGCGCACCGCCCACGCCCGCGCGATGGAACTCCTCGACGCCGTCGGCCTCGCCG
CCCAGGCCGGCCGCCGCCCCCACCAGCTCTCCGGCGGCCAGCGCCAACGCGTCAACATCGCCCGTGCCCTGATGAACGAC
CCCGCCGTCCTCCTGGTCGACGAACCCACCAGCGCCCTCGATCAGGAACGCGGCGCTGCCGTCATCGACCTGATCACCCG
TCTTACCCACCAGCAGGCCACCGCCACCGTCCTGGTCACCCACGACCGCGCCCACCTCACCGCCGTCGACCAGATCGCCG
AGGTCCACGATGGCAGGCTCGTCCTCTCAGCCGTGGCAACCTGA

Protein sequence :
MSLTLTGITLTYPDGDTRLTALDQVSLKVPQGSLTAVVGPSGSGKSSLLAVAATLITPDTGTVTIDGQSTIGLTPGALTK
LRRHKIGIVFQQPNLLPSLTAAEQLQVMAQIDGRKPRTAHARAMELLDAVGLAAQAGRRPHQLSGGQRQRVNIARALMND
PAVLLVDEPTSALDQERGAAVIDLITRLTHQQATATVLVTHDRAHLTAVDQIAEVHDGRLVLSAVAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SHJGH_1017 YP_007690017.1 ABC transport system ATP-binding protein NC_008702.1.4606598. Protein 4e-30 43