Gene Information

Name : G655_05200 (G655_05200)
Accession : YP_007707889.1
Strain : Pseudomonas aeruginosa B136-33
Genome accession: NC_020912
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1116883 - 1117392 bp
Length : 510 bp
Strand : -
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence :

GTGTCGAGCGCCGACCTCGCCCACGCGGCCGCGTTGCATACCCTCTACAGCGACCACCACCACTGGCTCACGGGCTGGCT
GCGGCGCCGCCTCGGCTGCCCGCAGAACGCCGCCGACCTGGCCCAGGACACCTTCGTCAAGGTCCTGGTTTCGCGCCAGG
CCCCGCGCATCGACGAACCGCGCGCCTTCCTCACCACCATCGCCCGCCGCGTGCTGTGCAACCACTACCGCCGCCAGGAC
GTCGAGCGCGCCTACCTGGAAGCCCTGGCCAGCCTGCCCGAGCGGGAAGTCCCCAGCGAAGAGACCCGCGCTATCGTCCT
GGAGACCCTGGTCGAGCTGGACCGCCTGCTCGACGGCCTGCCGCCGCTGGCCAAGGAGACCTTCCTGCTGGCCCAGCTCG
ACGGCCTGGGCTACGCCGAGATCGCCACGCAGCTGGGCATCTCCCTGAGCAGCGTCAAGCGCTACATGCTCAAGGCTGCG
CAACGCTGCTACTTCGCCGAGCTGCCATGA

Protein sequence :

MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDTFVKVLVSRQAPRIDEPRAFLTTIARRVLCNHYRRQD
VERAYLEALASLPEREVPSEETRAIVLETLVELDRLLDGLPPLAKETFLLAQLDGLGYAEIATQLGISLSSVKRYMLKAA
QRCYFAELP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	9e-37	53

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
G655_05200	YP_007707889.1	RNA polymerase sigma factor	VFG1049	Protein	4e-37	53