Gene Information

Name : G655_25820 (G655_25820)
Accession : YP_007711994.1
Strain : Pseudomonas aeruginosa B136-33
Genome accession: NC_020912
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5643371 - 5643907 bp
Length : 537 bp
Strand : -
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence :

ATGAATGCGCCAAGCCCCTGCCTGCAAGCGGACCGCGACTGCGTCGCCACGCTCTACCGTGAAAACCATGCCTGGTTGCG
CAACTGGCTGGCCTACCGCCTTCGCTCCTGGGGACGTGGCGTGGCCGACGACCTGGCCCACGACACTTTCCTGCGCATCC
TCGCCAGCCGCGATGGCGGCCAGCGTGACGCGATCCGTCAGCCGCGCGCCTACCTCACCCGCATCGCCAACTGCGTGCTG
GTCAGCTGGCGCCGTCGCCAATCGCTGGAACTCGCCTGGCTGGAGGCCCTGGCCACGTTGCCCGAGCCGTTGCAGCCGTC
GCCGGAACAACAGAGTGTGATCGTCGAGACCCTGCACGAGATCGACGCGCTGCTCGACACCCTGCGACCGCGGGTGAAAC
AGGCATTCCTGATGGCGACGCTGGACGGCATGAAGCAGAAGGACATCGCCCAGGCGCTGGGCGTCGCGCTGCCGACGGTG
AAGAAGTTCATCCACCAGGCCTACGTGACCTGCCTGAGCCTGATGCCCGATGAATGA

Protein sequence :

MNAPSPCLQADRDCVATLYRENHAWLRNWLAYRLRSWGRGVADDLAHDTFLRILASRDGGQRDAIRQPRAYLTRIANCVL
VSWRRRQSLELAWLEALATLPEPLQPSPEQQSVIVETLHEIDALLDTLRPRVKQAFLMATLDGMKQKDIAQALGVALPTV
KKFIHQAYVTCLSLMPDE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-18	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
G655_25820	YP_007711994.1	RNA polymerase sigma factor	VFG1049	Protein	4e-19	43