Gene Information

Name : CC1_05930 (CC1_05930)
Accession : YP_007768899.1
Strain : Coprococcus catus GD/7
Genome accession: NC_021009
Putative virulence/resistance : Virulence
Product : Carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 629576 - 629872 bp
Length : 297 bp
Strand : +
Note : -

DNA sequence :

ATGGCAGACAGATTATTAGCATTAGGTATGATTGAAACAAAAGGTCTTGTAGGTTCTATTGAAGCGGCAGATGCAATGGT
TAAAGCAGCGAATGTCAACTTAATCGGCAAGGTACATGTTGGCGGCGGTCTTGTAACTGTTATGGTAAGAGGCGATGTAG
GTGCTGTTAAGGCAGCAACAGACGCAGGTGCAGCAGCAGCTTCCCGTGTCGGTGAACTTGTTTCTGTACATGTCATCCCA
AGACCACACGAAGAGATCGAATACATTCTGCCGACACTGACAACTTCTGACAGATAG

Protein sequence :

MADRLLALGMIETKGLVGSIEAADAMVKAANVNLIGKVHVGGGLVTVMVRGDVGAVKAATDAGAAAASRVGELVSVHVIP
RPHEEIEYILPTLTTSDR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42077.1	hypothetical protein	Not tested	PAI II 536	Protein	1e-14	70
unnamed	CAD42078.1	hypothetical protein	Not tested	PAI II 536	Protein	8e-14	63
unnamed	CAD42079.1	hypothetical protein	Not tested	PAI II 536	Protein	1e-12	63

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CC1_05930	YP_007768899.1	Carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1596	Protein	5e-15	70
CC1_05930	YP_007768899.1	Carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1597	Protein	3e-14	63
CC1_05930	YP_007768899.1	Carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1598	Protein	4e-13	63