Gene Information

Name : RO1_17400 (RO1_17400)
Accession : YP_007778089.1
Strain : Roseburia intestinalis XB6B4
Genome accession: NC_021012
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 1742832 - 1743521 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
ATGATACTGAATCTGCAGAATATTTACAAGGATTATCAGCAGGATAAGCTGGTCGTTCCGGTATTAAAAGATGTTTGTCT
TACCGTGGAAGAGGGAGAGTATGTTGCGATCATGGGACCGTCCGGTTCCGGAAAGACAACACTTATGAATATCATAGGCT
GTCTGGATAAGCCGACGAGCGGGACTTATGAGCTGGCAGGAGAGGACGTCTTAAAGTTAAAAGACAAGCAGCTGTCAGAT
TTAAGACTGCGCAGTATCGGGTTTGTATTTCAGAGTTTTCATCTGATGCCGAGAGAGACTGCGGTGGAAAATGTATCACT
GCCGCTTAGTTATGCCGGCGTGAAAAAAAAGGAGCGCAGGGAGCGTGCAATCAAAGCACTGGAACGTGTCGGACTTGGTG
ACAGGGTGGACTTTCGTCCGACGCAGCTTTCCGGTGGACAAAAACAGAGGGTTGCGATTGCGAGAGCAATGGTCAATAAT
CCAAAGATCTTACTTGCGGATGAACCTACCGGAGCACTTGATTCCAAGTCAGGAGAGCAGATCATGGAACTGTTCCAGAA
ACTCAATGAAGAGGGTGTTACGATCGTTATGATCACACATGATCCGCATATCGCATCCAATGCAAAACGCATGGTGAAAA
TCATTGACGGGGAGATTTTTGAGGGCGATGAAAAGGAGGATGCATCATGA

Protein sequence : 
MILNLQNIYKDYQQDKLVVPVLKDVCLTVEEGEYVAIMGPSGSGKTTLMNIIGCLDKPTSGTYELAGEDVLKLKDKQLSD
LRLRSIGFVFQSFHLMPRETAVENVSLPLSYAGVKKKERRERAIKALERVGLGDRVDFRPTQLSGGQKQRVAIARAMVNN
PKILLADEPTGALDSKSGEQIMELFQKLNEEGVTIVMITHDPHIASNAKRMVKIIDGEIFEGDEKEDAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RO1_17400 YP_007778089.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 1e-53 57
RO1_17400 YP_007778089.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 2e-44 50
RO1_17400 YP_007778089.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-34 42
RO1_17400 YP_007778089.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 3e-34 42