Gene Information

Name : RO1_36510 (RO1_36510)
Accession : YP_007779678.1
Strain : Roseburia intestinalis XB6B4
Genome accession: NC_021012
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3618692 - 3619396 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGCCATCATTCGTAACATTTTCCAACGTCGGCAAAATCTACCACACCGGCGAACTCGACATCACCGCCCTCCATGACGT
CAATTTTGAGATCGAAAAAGGAGAATTCTGCGTCATCGTCGGTGCATCCGGTGCCGGCAAAACGACGATTTTAAATATAT
TAGGAGGAATGGATACCTTAACCAGCGGACAGGTATTCTTAGACGGACAGGAAATCTCAAACTATGACAAAAAACAGCTC
ACCTCATACCGGCGTTTCGACATCGGATTTGTGTTCCAGTTTTACAACCTCGTGCAGAACCTGACAGCACTTGAAAATGT
AGAGCTTGCGGCGCAGATCTGTAAAGATCCGCTTCCGGCGCCGACAGTGCTTGAGGAAGTCGGGTTGAAAGACCGTCTGT
TAAATTTCCCGGCACAGCTTTCCGGTGGAGAACAGCAGCGTGTCGCGATCGCGCGTGCGCTTGCAAAAAACCCGAAACTT
CTGCTCTGCGATGAGCCAACCGGAGCTCTCGATTATAATACCGGAAAAGCGGTTTTAAAATTATTGCAGGACACCTGCCG
CGAAAATGGAAAAACAGTCGTGGTCATCACGCATAACCAGGCACTTACAGCGATGGCGGACCGCATCATCACGGTAAAGA
GCGGCACAGTCGTTTCCATGGAAAAAAATGAACACATTGTAGACATTGCAGATATAGAGTGGTAG

Protein sequence : 
MPSFVTFSNVGKIYHTGELDITALHDVNFEIEKGEFCVIVGASGAGKTTILNILGGMDTLTSGQVFLDGQEISNYDKKQL
TSYRRFDIGFVFQFYNLVQNLTALENVELAAQICKDPLPAPTVLEEVGLKDRLLNFPAQLSGGEQQRVAIARALAKNPKL
LLCDEPTGALDYNTGKAVLKLLQDTCRENGKTVVVITHNQALTAMADRIITVKSGTVVSMEKNEHIVDIADIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-32 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RO1_36510 YP_007779678.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 1e-63 62
RO1_36510 YP_007779678.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-38 45
RO1_36510 YP_007779678.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 9e-41 42
RO1_36510 YP_007779678.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 1e-40 42