Gene Information

Name : CK1_20650 (CK1_20650)
Accession : YP_007783748.1
Strain : Ruminococcus sp. SR1/5
Genome accession: NC_021014
Putative virulence/resistance : Virulence
Product : Carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1767615 - 1767956 bp
Length : 342 bp
Strand : -
Note : -

DNA sequence : 
ATGGGAAAATCATATGGATTTATAGAAATCACTGGTGTAGTTGCGGCGATCAATGCCCTGGACATCATGTGCAAAACGGC
AGACGTTGAGCTGGCGTCATGGGAGCGTAAGCTGGGCGGACGACTGGTGACCCTGATCGTACAAGGCGATGTATCAGCAG
TTACAGCAGCTGTCAATGCAGCAGTAGAACAGGCTATCAAGAAGCCTGCCAGCTATGCGGTAATTGCCAATCCCCACGAG
GAAATCGTCAAACTGGTTGAGCTGAGTGCAAGCCGGTGGAAAAAGAAACAGCAAGAAGATCCGGAAGAAGCACTGGAAAG
CAAAAACAGCAGCAAAAAATAA

Protein sequence : 
MGKSYGFIEITGVVAAINALDIMCKTADVELASWERKLGGRLVTLIVQGDVSAVTAAVNAAVEQAIKKPASYAVIANPHE
EIVKLVELSASRWKKKQQEDPEEALESKNSSKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-06 50
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-05 49
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-07 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK1_20650 YP_007783748.1 Carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 5e-07 50
CK1_20650 YP_007783748.1 Carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 6e-06 49
CK1_20650 YP_007783748.1 Carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 2e-07 47