Gene Information

Name : CK1_20660 (CK1_20660)
Accession : YP_007783749.1
Strain : Ruminococcus sp. SR1/5
Genome accession: NC_021014
Putative virulence/resistance : Virulence
Product : Carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1768000 - 1768275 bp
Length : 276 bp
Strand : -
Note : -

DNA sequence :

ATGGCACAGGAAGCATTAGGAATGGTTGAGACAAGAGGCCTCACAGCGGCAATCGAGGCAGCAGATGCAATGACAAAAGC
AGCAGAGGTTGCACTTGTAGGAACAGAGAAGATCGGTTCCGGTCTTGTAACTGTTATGGTTCGTGGAGACGTAGGCGCTG
TAAAAGCAGCAGTAGAGAGCGGAAGCGCAGCAGCATCCAGACTTGGAGAGCTCGTAGCTACACACGTAATCCCGAGACCT
CATACAGACGTAGAGAAAATCCTTCCAAAGCTCTGA

Protein sequence :

MAQEALGMVETRGLTAAIEAADAMTKAAEVALVGTEKIGSGLVTVMVRGDVGAVKAAVESGSAAASRLGELVATHVIPRP
HTDVEKILPKL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42077.1	hypothetical protein	Not tested	PAI II 536	Protein	1e-23	68
unnamed	CAD42079.1	hypothetical protein	Not tested	PAI II 536	Protein	1e-22	63
unnamed	CAD42078.1	hypothetical protein	Not tested	PAI II 536	Protein	2e-23	63

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CK1_20660	YP_007783749.1	Carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1596	Protein	6e-24	68
CK1_20660	YP_007783749.1	Carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1598	Protein	5e-23	63
CK1_20660	YP_007783749.1	Carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1597	Protein	7e-24	63