Gene Information

Name : CK1_22960 (CK1_22960)
Accession : YP_007783937.1
Strain : Ruminococcus sp. SR1/5
Genome accession: NC_021014
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1982640 - 1983407 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATTACTGGAAGTAACAAATGTAAAAAAGATATACAGCACCCGCTTCGGCGGAAATAAAGTGCAGGCACTTTTCAA
TGTGACATTTTCGGTGGAAGAAGGAGAATATGTGGCGATCATGGGAGAGTCCGGTTCCGGAAAAACAACACTTCTGAATA
TTCTGGCAGCCCTGGACCGCCCCACATCCGGCGAAGTGCTTCTGGAAGGAAAAAGCATTACTCACCTGACAGAAAAAGAA
ATTTCCGCATTCCGTCGGAAGAACTTAGGCTTCGTGTTCCAGGATTTCAATCTTCTGGACACCTTCAGCCTCCGGGACAA
TATTTATCTTCCTCTCGTGCTGGCAGGGGAAGATTATCAGGAGATGGAGCAGAAGATCCGTCCCATTGCAAAAGCCCTTC
ACATCAACCAGCTTCTGGAAAAATTCCCCTACGAGGTTTCCGGCGGACAGAAGCAGAGAGCAGCAGTTGCAAGGGCACTG
ATCACAGATCCGAAGCTGATCCTTGCGGACGAACCGACCGGAGCCCTGGATTCCCGTGCAGCCTCCGATCTTCTTTCCAT
GTTCAATGAGGTAAATCGGGAAGGCCAGACCATTCTCATGGTAACTCACAGCGCGCAGGCCGCCAGCCACGCATCCAGAG
TACTTTTTATCAAGGATGGCGAAGTGTTCCACCAGATCTACCGTGGCACAAAAACAAGACAGGAAATGTACCAGATGATT
GCAGATACCCTGACGATCCTTACGACAGGCGGTGAGACCTATGCGTAA

Protein sequence : 
MALLEVTNVKKIYSTRFGGNKVQALFNVTFSVEEGEYVAIMGESGSGKTTLLNILAALDRPTSGEVLLEGKSITHLTEKE
ISAFRRKNLGFVFQDFNLLDTFSLRDNIYLPLVLAGEDYQEMEQKIRPIAKALHINQLLEKFPYEVSGGQKQRAAVARAL
ITDPKLILADEPTGALDSRAASDLLSMFNEVNREGQTILMVTHSAQAASHASRVLFIKDGEVFHQIYRGTKTRQEMYQMI
ADTLTILTTGGETYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK1_22960 YP_007783937.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 1e-43 46
CK1_22960 YP_007783937.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-39 45
CK1_22960 YP_007783937.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 1e-40 42