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Name : RTO_04040 (RTO_04040) Accession : YP_007785681.1 Strain : [Ruminococcus] torques L2-14 Genome accession: NC_021015 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : - COG ID : - EC number : 2.4.2.21 Position : 400078 - 401196 bp Length : 1119 bp Strand : + Note : - DNA sequence : ATGATAGATAATAGAAGAAAAACAACAAAAATGCAAAAGATGTCGATGAACAAAAATGAAAGATTGTTAATTGAAAAATT CAAAATGATAAATCCGGTGGAGAAGTTGTGTGAAGAAGATGCGAAAAGACGATGGAAAACAGTCGCGAAACCACTGTTCA GTCTTGGAAAGCTTGAAGACGCTGTGATACGAATGGCAGGAATCCGAAGAAGTGCGGAGTTTGAGATTAAAAAGAAAGGC TTGCTGATCTTTTGTGCGGATAACGGGGTTGTCTCAGAAGGAGTGACTCAGACCGGGCAGGAAGTGACAGCAATCGTTGC AGACAATTTTACAAAATGTGCGACGAGCGTATGTATTATGGCAGAGACAGCCGGAGTGGACTTATTTCCAATTGATGTTG GAATGGTGAAAGACGTTCCATCTGTCACAAAACCAAAAGACAAAGTGATGTATGGAACAAAGAATATGGCGATGGAACCT GCAATGTCAAGAGAACAGGCTGCACAAGCCGTTCTTATTGGCATACGAAAGGTCAAAGAGCTGGCAGAACAAGGGTATGA TCTAATCGCAACCGGTGAGATGGGAATTGGGAATACAACGACAAGCAGTGCGATTGTGTCCGTTCTGCTTGATGAAAGCG TAGAAAATGTAACAGGAAGAGGCGCAGGGCTTAGTTCAGAAGGGCTGAATAGAAAGATTCGTGCAATTAAGAGAGCAATT GAAAAGCATCAGCCGGACAAGGAAGATGTTTTAGATGTCTTATCCAAAGTCGGAGGGCTTGATATTGCCGGAATGACAGG TGCATTTCTAGGTGGTGCGATGTATCATATCCCGGTTCTGATTGATGGATTTATCTCTTCTGCAGCAGCCTTGTGTGCAG TGAGAATGGTTCCTGAGACGGCGGATTATATCTTGGCATCACATTGCTCTGGAGAACCGGCTGGGCGAATGGTCTTAGAA GAGCTGAAACTTCCATATCTGATTGATGCAAATATGTCTCTTGGAGAAGGCAGTGGCGCAGTTGCAGCGGTTCCGCTTCT TGAGATGGGTGTGAATGTTTATCGGAAGATGAGCACCTTTGAAGAGATTAAAGTAGAGCAGTATGAAGAGCTTAAGTGA Protein sequence : MIDNRRKTTKMQKMSMNKNERLLIEKFKMINPVEKLCEEDAKRRWKTVAKPLFSLGKLEDAVIRMAGIRRSAEFEIKKKG LLIFCADNGVVSEGVTQTGQEVTAIVADNFTKCATSVCIMAETAGVDLFPIDVGMVKDVPSVTKPKDKVMYGTKNMAMEP AMSREQAAQAVLIGIRKVKELAEQGYDLIATGEMGIGNTTTSSAIVSVLLDESVENVTGRGAGLSSEGLNRKIRAIKRAI EKHQPDKEDVLDVLSKVGGLDIAGMTGAFLGGAMYHIPVLIDGFISSAAALCAVRMVPETADYILASHCSGEPAGRMVLE ELKLPYLIDANMSLGEGSGAVAAVPLLEMGVNVYRKMSTFEEIKVEQYEELK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 5e-50 | 41 |
