|
Name : GPA_13870 (GPA_13870) Accession : YP_007802401.1 Strain : Gordonibacter pamelaeae 7-10-1-bT Genome accession: NC_021021 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 1405721 - 1408381 bp Length : 2661 bp Strand : + Note : - DNA sequence : ATGAGCATGGGAAACCTGAACAAACTGGCCCTGACCGCCCAGGAGGCGTTGCAGCAGACCATCACCATCGCCTCCGAGAA CGAAGCATCCCAAGCGGAGCCTATCCATATGCTGAAGGCCTTGCTTGAATCGAAGGAGAACAACCTGTCGGCCATCATCA AGCGCATCGGCGCCGAGCCGTTCCAGCTGATGGCCAACGTGGACGACGAGATCCTGCGCATGCCGAAGGTGAGCGCGAGC GGCCCCATGATGATGAGCGGCGTGCCGGGCCCGGCGCTCATGGGCCTCATCGACAGCGCCGTGAAGATCGCCGAGAAGCT GGGAGACAGCTACGCCACGAGCGAGCATCTGCTCATCGCGCTGGCCGAGGAGAAGGGCGCCGCCGGCAAGATACTCAACG CCGCAGGCATCACGCGCAAGACCATCGAGGCGGCCTACGAGGAGCTGCGCGGCGACACCCGCGTGACCGACCAGCAGAAC AAGGTGCAGTTCGAGGCGCTGGAGCAGTACGGCCAGAACCTCACCCAGCAGGCCCGCGAGGGCAAGCTCGACCCGGTCAT CGGCCGCGCCGAGGAGATCCGCCGCACCATCCAGGTGCTGTCCCGCCGCACGAAGAACAACCCCGTGCTCATCGGCGAGC CCGGCACCGGCAAGACGGCCATCGTGGAGGGCCTGGCCCAGCGCATCGTCGACGGCGACGTGCCCTCGTCGCTCAAGGAC CGAGACATCATCGCCCTCGATCTGCCGGCGATGCTGGCCGGCGCTAAATACCGCGGCGAGTTCGAGGACCGCCTGAAGGC CGTGCTGCGCGAGGTGAAGCAGAGCGAGGGGCAGATCATCCTGTTCATCGACGAGCTGCACACCATCGTGGGCGCCGGCT CCACCGGCGACAGCTCCATGGACGCCGGCAACATGCTCAAGCCCGCCCTCGCCCGCGGCGAGCTGCACGCCATCGGCGCC ACCACGCTCGACGAGTACCGCAAGTACATCGAGAAGGACGCGGCCCTCGAGCGCCGCTTCCAGCCGGTGCTGGTCACGGA GCCCACGGTGGAGGATACCATCGCCATCCTGCGCGGCCTGAAGGAGAAGTACGAGATCCACCACGGCGTGCGCATCACCG ACGCCGCCATCGTGGCCGCGGCCGAGCTCTCGAACCGCTATATCTCCGACCGCTTCCTGCCCGACAAGGCCATCGACCTC ATGGACGAGGCCGCCAGCCGCCTGCGCATCGAGATCGACTCCATGCCGGAGGAAGTTGACGCGGCCGACCGCAAGCTCAC CCAGATGCAGATCGAGGAGCAGGCGCTCATGAAGGAGACCGACGAGGCCTCCAAGGAGCGTCTGGAGGTGCTGCGCCGCG ACATCGCCGCCGCCCAGGAGGACCTCGACAAGCGCAAGGCCGAGTGGCAGAACGAGAAGGACGCCATCGTGAACGTGCAG GAGCTCAAGAGCGAGCTCGAAGGCGCCCAGCTGGAAGAGGAGCGCGCCACGCGCGAGGGCGACCTGGTGAAGGCGTCCGA GATCCGCTACGCCCGCATCCCCGACCTGCAGCGCCGCCTGCACGCCGCCGAAGAGGCGTTGAACGTGAAGCAGCAGGACG GCGCCATCTTGAAGGAGGAGGTGTCCGACGACGAGATCGCCGAGGTCGTGTCCACCTGGACGGGCATCCCCGTGCAGAAG ATGATGCAGGGCGAGATGGCGAAGCTCGTGGACCTGGAGGAGAAGCTGCACGAGCGCGTGGTGGGCCAGGACGAGGCCGT GTCCTCGGTGGCCGGCGCCATCCGCCGCAACCGCGCCGGGCTCTCCGACCCCGACCGCCCCATCGGCTCGTTTTTGTTCC TGGGCCCCACGGGCGTGGGCAAGACGGAGCTGGCGAAGGCGCTGGCCGAGTACCTGTTCGACAGCGAGCGCGCCATGGTG CGCATCGACATGTCCGAGTACATGGAGAAGTTTTCCGTCCAGCGCCTCATCGGCGCGCCTCCGGGGTACGTGGGCTACGA CGAGGGCGGCCAGCTGACCGAGGCCGTGCGCCGCAAGCCGTACTCCGTGGTGCTGCTGGACGAGATAGAGAAGGCGCACC CGGACGTGTTCAACATCCTGTTGCAGGTGCTCGATGACGGTCGCCTGACCGACGGACAGGGCCGCGTGGTGTCGTTCAAG AACGCCATCATCATCATGACGTCGAACGTGGGAAGCCAGTTCATCCGCGAGTTCGCCGAGCACGGCGACGAGAAGGCCAT GAAGCAGGCCATCGACGGCGCCCTGCGCGCGACGTTCCGCCCCGAGTTCATCAACCGCATCGACGACGTGGTGGTGTTCA ACGCGCTCAACATGACGAACATCGAGCCCATCGTGGACCTGCAGCTTGAGGAGGTGCGCGACCGCCTGGCCGACCGCCGC ATCACCCTCGACGTGACGCCGGCCGCGATGGAGCATCTGTCCATCGACGGCTACGACCCCATCTTCGGCGCGCGCCCGCT GAAGCGCCTCATCCAGAAGGAGATCGTGGACCGCATCGCCCAGAAGGTGGTGGAGGGCCAGTTGCGCGACCGCAGCCACG TGCTCATCGACATCGACGCCGACGGCAACTACCAGTGCACCGTCGAGGCCCCCTTGGAGCTCGACGCCACGGCTCTGGAC GACCTGCTGCTGGAGAAGTAG Protein sequence : MSMGNLNKLALTAQEALQQTITIASENEASQAEPIHMLKALLESKENNLSAIIKRIGAEPFQLMANVDDEILRMPKVSAS GPMMMSGVPGPALMGLIDSAVKIAEKLGDSYATSEHLLIALAEEKGAAGKILNAAGITRKTIEAAYEELRGDTRVTDQQN KVQFEALEQYGQNLTQQAREGKLDPVIGRAEEIRRTIQVLSRRTKNNPVLIGEPGTGKTAIVEGLAQRIVDGDVPSSLKD RDIIALDLPAMLAGAKYRGEFEDRLKAVLREVKQSEGQIILFIDELHTIVGAGSTGDSSMDAGNMLKPALARGELHAIGA TTLDEYRKYIEKDAALERRFQPVLVTEPTVEDTIAILRGLKEKYEIHHGVRITDAAIVAAAELSNRYISDRFLPDKAIDL MDEAASRLRIEIDSMPEEVDAADRKLTQMQIEEQALMKETDEASKERLEVLRRDIAAAQEDLDKRKAEWQNEKDAIVNVQ ELKSELEGAQLEEERATREGDLVKASEIRYARIPDLQRRLHAAEEALNVKQQDGAILKEEVSDDEIAEVVSTWTGIPVQK MMQGEMAKLVDLEEKLHERVVGQDEAVSSVAGAIRRNRAGLSDPDRPIGSFLFLGPTGVGKTELAKALAEYLFDSERAMV RIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRVVSFK NAIIIMTSNVGSQFIREFAEHGDEKAMKQAIDGALRATFRPEFINRIDDVVVFNALNMTNIEPIVDLQLEEVRDRLADRR ITLDVTPAAMEHLSIDGYDPIFGARPLKRLIQKEIVDRIAQKVVEGQLRDRSHVLIDIDADGNYQCTVEAPLELDATALD DLLLEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-151 | 48 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-113 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 8e-109 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 6e-109 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| GPA_13870 | YP_007802401.1 | ATP-dependent chaperone ClpB | VFG0079 | Protein | 5e-164 | 48 |
| GPA_13870 | YP_007802401.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 4e-116 | 43 |
