Gene Information

Name : CK5_18280 (CK5_18280)
Accession : YP_007805203.1
Strain : [Ruminococcus] obeum A2-162
Genome accession: NC_021022
Putative virulence/resistance : Virulence
Product : Carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1850500 - 1850817 bp
Length : 318 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAAAGCATATGGTTTTATAGAGATCACTGGTGTCGTAGCTGCGATCAATGCGCTCGATATCATGTGCAAAACTGC
AGACGTTGAGCTGGCGTCATGGGAACGTAAGCTGGGCGGACGACTTGTCACTCTTATTGTAGAAGGCGATGTATCAGCAG
TCAACGAAGCTGTTGAAGCTGCTGTTGCAAACGCTATTAAGAAACCGGCGAGTTATGCAGTGATTGCACGACCACACGAG
GAAATCGTCAAACTCGTGGAGTTAAGTGCAAGCCGTTGGAAGAAAAAAACAGACGAAACAAAACCAGAAAATAAATAA

Protein sequence : 
MSKAYGFIEITGVVAAINALDIMCKTADVELASWERKLGGRLVTLIVEGDVSAVNEAVEAAVANAIKKPASYAVIARPHE
EIVKLVELSASRWKKKTDETKPENK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-07 50
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 8e-08 49
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-08 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CK5_18280 YP_007805203.1 Carbon dioxide concentrating mechanism/carboxysome shell protein VFG1596 Protein 7e-08 50
CK5_18280 YP_007805203.1 Carbon dioxide concentrating mechanism/carboxysome shell protein VFG1597 Protein 3e-08 49
CK5_18280 YP_007805203.1 Carbon dioxide concentrating mechanism/carboxysome shell protein VFG1598 Protein 1e-08 47