Gene Information

Name : CL3_28210 (CL3_28210)
Accession : YP_007810439.1
Strain : butyrate-producing bacterium SM4/1
Genome accession: NC_021024
Putative virulence/resistance : Virulence
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2451447 - 2452121 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGGTTGTGGGCCTCAGAAATATAAACCTGACCATAAAAAGAGGCGAGTTTGTCGCTATCATGGGACAGTCAGGTTC
GGGCAAATCTACCTTTATGAATATCCTGGGCTGTCTGGACCGGCCTCTGATCGGCCATTACTATCTGGACGGCATTGATA
TCAACGCCATGGATGACAGGATGCTCTCCCGGATCAGAAATCAGAAGATAGGCTTCGTATTCCAGTCTTTCAACCTGATT
TCCAGAACCACGGCCAGAGAGAATGTGGAGCTTCCCATGACCTACGCCCATGTACCCAAGCATGAGAGAAGGGAGAGGGC
TATACGGCTGCTGGAACGTGTGGGGCTGGGGGCAAGGACGGAGCACATGCCAAATGAGATGTCCGGCGGCCAGCGCCAGC
GGGTGGCGATTGCCAGAGCCCTTGCCAATGATCCGCCTCTGATTCTGGCGGATGAGCCCACCGGAAACCTGGATACGGCG
GCTTCTCTGGAGATTATGGAGCTCTTTTCAGAGCTTCACAGGGAGGGGGCTACGGTGGTTGTCGTCACCCATGAGGAGGA
TATAGCAGCCTTCACGGAACGCATTATCCGCTTCCGGGACGGGCGGATCATAAGCGACGAGAGGAGAGGAAAGACCGGCC
GGGAGGATACGCCGAAGGAGGTGGAGGAATGTTAA

Protein sequence : 
MKVVGLRNINLTIKRGEFVAIMGQSGSGKSTFMNILGCLDRPLIGHYYLDGIDINAMDDRMLSRIRNQKIGFVFQSFNLI
SRTTARENVELPMTYAHVPKHERRERAIRLLERVGLGARTEHMPNEMSGGQRQRVAIARALANDPPLILADEPTGNLDTA
ASLEIMELFSELHREGATVVVVTHEEDIAAFTERIIRFRDGRIISDERRGKTGREDTPKEVEEC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CL3_28210 YP_007810439.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 5e-51 54
CL3_28210 YP_007810439.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 4e-38 48
CL3_28210 YP_007810439.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-33 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CL3_28210 YP_007810439.1 ABC-type antimicrobial peptide transport system, ATPase component VFG2059 Protein 6e-14 42