Gene Information

Name : SY1_01180 (SY1_01180)
Accession : YP_007826929.1
Strain : Synergistetes bacterium SGP1
Genome accession: NC_021038
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 116117 - 116848 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCCTCCCGGATGCCGCTTCGGAGAGGGCCGCGTGCCCTCTGATCGAGGTCGAGGACCTCGTCAAGGTCTATCGGAC
CGGGGACGTGGAGCTGCGCGCGCTGGATGGCGTCTCCTTCTCGGTGGCCCACGGGGAGTTCGTGGCGGTGATGGGGCCGT
CGGGCTCTGGAAAGTCCACGACGATGAACATGCTGGGCTGCCTCGACTCTCCCACCGATGGGCGCTACCTCCTGGACGGG
CGGGACGTGGCGCACCTGTCGGGCGACGAGCTGGCGAAGGTCCGCAACGGGAAGCTGGGTTTCGTGTTCCAGGGGTTCAA
CCTGCTGCCGCGCCTGTCGGCCGTGGATAACGTCGCGCTCCCCCTCGTCTACGCGGGGGTCCCCGCCAGGGAGCGCCGCG
AGCGGGCCCGCGGGGCCCTGGAGCGCGTGGGGTTGGGTGCCCGTCTGGAACACAGGCCCAACCAGATGAGCGGTGGGCAG
CAGCAGCGCGTCGCCATCGCGCGGGCCCTCGTCGGCAGGGCGCCCCTGATCCTGGCCGACGAGCCGACGGGGAACCTGGA
CACGCGGACGAGCGAGGAGATCATGGACCTTCTCGTCGAGGTCAACCGGGAGGGCAAGACGGTGGTCCTGGTGACGCACG
AGCCGGACATCGCCGCTTACGCGCGGCGCATTTTGAAGTTCAAGGACGGTCGCCTGGTCTCCGACGAGACGGCTTCGGGA
AGGGAGGAGTAA

Protein sequence : 
MSLPDAASERAACPLIEVEDLVKVYRTGDVELRALDGVSFSVAHGEFVAVMGPSGSGKSTTMNMLGCLDSPTDGRYLLDG
RDVAHLSGDELAKVRNGKLGFVFQGFNLLPRLSAVDNVALPLVYAGVPARERRERARGALERVGLGARLEHRPNQMSGGQ
QQRVAIARALVGRAPLILADEPTGNLDTRTSEEIMDLLVEVNREGKTVVLVTHEPDIAAYARRILKFKDGRLVSDETASG
REE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-30 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SY1_01180 YP_007826929.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 8e-59 56
SY1_01180 YP_007826929.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 9e-47 52
SY1_01180 YP_007826929.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 4e-39 46
SY1_01180 YP_007826929.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-39 41