Gene Information

Name : SY1_15580 (SY1_15580)
Accession : YP_007827804.1
Strain : Synergistetes bacterium SGP1
Genome accession: NC_021038
Putative virulence/resistance : Virulence
Product : Carbon dioxide concentrating mechanism/carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1704363 - 1704644 bp
Length : 282 bp
Strand : +
Note : -

DNA sequence :

ATGAACGGTGAAGCTCTTGGAATGATCGAAACCCGCGGTTTGGTTGGGGCCATCGAGGCCGCAGACGCCATGGTGAAGGC
GGCGAACGTCCACCTGATCGGGTACGAGAAGATCGGCTCCGCCTACGTGACCGTCATGGTCCGCGGCGACGTGGGCGCGG
TGAAGGCCGCCGTCGACGCCGGCGCGGCTGCGGCGAAGCGCGTTGGCGAGGTCGTGTCGGTCCACGTGATCCCAAGACCC
CACTCCGACACGGAAAAGCTTCTTCCCAAGTCCGGGGAGTAG

Protein sequence :

MNGEALGMIETRGLVGAIEAADAMVKAANVHLIGYEKIGSAYVTVMVRGDVGAVKAAVDAGAAAAKRVGEVVSVHVIPRP
HSDTEKLLPKSGE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42077.1	hypothetical protein	Not tested	PAI II 536	Protein	7e-12	71
unnamed	CAD42078.1	hypothetical protein	Not tested	PAI II 536	Protein	1e-11	67
unnamed	CAD42079.1	hypothetical protein	Not tested	PAI II 536	Protein	1e-11	65

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SY1_15580	YP_007827804.1	Carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1596	Protein	3e-12	71
SY1_15580	YP_007827804.1	Carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1597	Protein	6e-12	67
SY1_15580	YP_007827804.1	Carbon dioxide concentrating mechanism/carboxysome shell protein	VFG1598	Protein	4e-12	65