Gene Information

Name : RUM_07240 (RUM_07240)
Accession : YP_007828930.1
Strain : Ruminococcus champanellensis 18P13
Genome accession: NC_021039
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 790180 - 790884 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGGCGGCATTTGTAACGCTGCGGGATGTACGGAAGGAATACCGGATGGGGGAGGTGCTGATCAAGGCATCCGACGGCAT
CTCCTTTGAGCTGGAGAAGGGAGAATTCGTGGTGATCGTGGGGCCTTCCGGTGCCGGGAAAACCACCGTGCTGAATATGC
TGGGAGGCATGGACACCTGCGACTCCGGGGAAATCATCGTGGACGGGCAGGACATTGCCAGACTGAAGAAAAAGGAGATC
ACCCGGTATCGCCGGTACGACATCGGCTTCGTGTTCCAGTTTTACAATCTGGTGCAGAATCTCACCGCCAAGGAAAATGT
GGAGCTTGCTACCCAGATTTGCCGGGATGCGGCGGACGCAGCCCAGATGCTTGAAAAGGTAGGGCTGGAAGATCGGATGG
ACAATTTTCCGGCACAGCTGTCCGGCGGGGAGCAGCAGCGTGTGTCCATTGCCCGTGCACTGGCGAAAAACCCCAAGCTC
CTGCTGTGCGATGAGCCAACCGGCGCCCTGGATTACCAGACCGGCAAGCACATCTTAAAGCTGTTGCAGGATACATGCCG
CCGGGATGGTATGACCGTGGTGGTCATCACCCACAATTCTGCCATTGCCCCTATGGCGGATCGGGTCATCGAGATCAAGA
ACAGCAAGGTACACGGGGTTCGGATGAATGCGCATCCGGAGCCGGTAGAGCAGATTGAGTGGTGA

Protein sequence : 
MAAFVTLRDVRKEYRMGEVLIKASDGISFELEKGEFVVIVGPSGAGKTTVLNMLGGMDTCDSGEIIVDGQDIARLKKKEI
TRYRRYDIGFVFQFYNLVQNLTAKENVELATQICRDAADAAQMLEKVGLEDRMDNFPAQLSGGEQQRVSIARALAKNPKL
LLCDEPTGALDYQTGKHILKLLQDTCRRDGMTVVVITHNSAIAPMADRVIEIKNSKVHGVRMNAHPEPVEQIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RUM_07240 YP_007828930.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 2e-66 61
RUM_07240 YP_007828930.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 4e-42 45
RUM_07240 YP_007828930.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 6e-39 42
RUM_07240 YP_007828930.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 9e-41 41