Gene Information

Name : RUM_08970 (RUM_08970)
Accession : YP_007829081.1
Strain : Ruminococcus champanellensis 18P13
Genome accession: NC_021039
Putative virulence/resistance : Unknown
Product : Transketolase, N-terminal subunit
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.1
Position : 984388 - 985227 bp
Length : 840 bp
Strand : +
Note : -

DNA sequence : 
ATGGACGCAACGATTGAAAAACGGCTGCAGGCCACTGCCTGCAAGGTGCGGATGGGCATCATCGAGGGCACCTACTGCGC
AAAATCCGGTCATCCCGGCGGATCATTATCCATTGCAGATCTGCTGACTTACCTGTATTTTGTAAAGCTGAATGTGGATC
CAAAGCATCCGGACATGCCGGAGCGTGACCGCTTTGTGCTGTCCAAGGGGCATACGGCACCGGCTTTGTATGCGACCCTG
GCACAGCGTGGCTTCTTCCCGGAGTCTGAACTGAGATCCCTGCGGCACATCGGAGCAATGCTTCAGGGTCATCCCTGCAT
CCACATTCCCGGCATCGATATGTCCAGCGGCTCCCTGGGACAGGGTATTTCTGCGGCATGCGGCATGGCACTGTCTGCAA
AGTATAACCAGAAGGATTATCGGGTCTATACCGTTCTGGGAGACGGTGAGATCGAGGAGGGACAGGTCTGGGAGGCTGCC
ATGTTCGCAGCCCACTACGGACTGGACAATCTGACTGCCATCGTGGACAATAACGGCTTACAGATCGATGGCCCCATCAC
AGAGGTCAGCTCTCCGGAGCCCATTCCGGATAAATTTGCTGCATTTGGCTGGCATGTAATTACCATGGATGCACATGACT
TCCAGGATATAGAGCGTGCTTTTGATGAGGCAGAAAAGATCAGCGGCAAGCCCGTTGTGATCGTGCAGAAGAGCGTCAAG
GGCAAGGGGGTTTCCTTTATGGAAAACCAGTGCAGCTGGCACGGCACTGCCCCGAATCAGGAGCAGTATGAACAGGCAAT
GACTGAATTGCGGACGCAGCTGTCCGGACTGGAGGGTTAA

Protein sequence : 
MDATIEKRLQATACKVRMGIIEGTYCAKSGHPGGSLSIADLLTYLYFVKLNVDPKHPDMPERDRFVLSKGHTAPALYATL
AQRGFFPESELRSLRHIGAMLQGHPCIHIPGIDMSSGSLGQGISAACGMALSAKYNQKDYRVYTVLGDGEIEEGQVWEAA
MFAAHYGLDNLTAIVDNNGLQIDGPITEVSSPEPIPDKFAAFGWHVITMDAHDFQDIERAFDEAEKISGKPVVIVQKSVK
GKGVSFMENQCSWHGTAPNQEQYEQAMTELRTQLSGLEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 3e-31 41
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 1e-31 41
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 7e-32 41
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 7e-32 41
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 2e-32 41