Gene Information

Name : ROI_15390 (ROI_15390)
Accession : YP_007831707.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1531639 - 1532343 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGCCATCATTCGTAACATTTTCCAACGTCGGCAAAATCTACCACACCGGCGAACTCGACATCACCGCCCTCCATGACGT
CAATTTTGAGATCGAAAAAGGAGAATTCTGCGTCATCGTCGGTGCATCCGGTGCCGGCAAAACGACGATTTTAAATATAT
TAGGAGGAATGGATACCTTAACCAACGGACAGGTATTCTTAGACGGACAGGAAATCTCAAACTATGACAAAAAACAGCTC
ACCTCATACCGGCGTTTCGACATCGGATTTGTGTTCCAGTTTTACAACCTCGTGCAGAACCTGACAGCACTTGAAAATGT
AGAGCTTGCGGCGCAGATCTGTAAAGATCCGCTTCCGGCGCCGACAGTGCTTGAGGAAGTCGGGTTGAAAGACCGTCTGT
TAAATTTCCCGGCACAGCTTTCCGGTGGAGAACAGCAGCGTGTCGCGATCGCGCGTGCGCTTGCAAAAAACCCGAAACTT
CTGCTCTGCGATGAGCCGACCGGAGCTCTCGATTATAATACCGGAAAAGCGGTTTTAAAATTATTGCAGGACACCTGCCG
CGAAAATGGAAAAACAGTCGTGGTCATCACGCATAACCAGGCACTTACAGCGATGGCGGACCGCATCATCACGGTAAAGA
GCGGCACAGTCGTTTCCATGGAAAAAAATGAACACATTGTAGACATTGCAGATATAGAGTGGTAG

Protein sequence : 
MPSFVTFSNVGKIYHTGELDITALHDVNFEIEKGEFCVIVGASGAGKTTILNILGGMDTLTNGQVFLDGQEISNYDKKQL
TSYRRFDIGFVFQFYNLVQNLTALENVELAAQICKDPLPAPTVLEEVGLKDRLLNFPAQLSGGEQQRVAIARALAKNPKL
LLCDEPTGALDYNTGKAVLKLLQDTCRENGKTVVVITHNQALTAMADRIITVKSGTVVSMEKNEHIVDIADIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ROI_15390 YP_007831707.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 8e-64 62
ROI_15390 YP_007831707.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-38 44
ROI_15390 YP_007831707.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 1e-40 42
ROI_15390 YP_007831707.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-40 42