Gene Information

Name : ROI_41380 (ROI_41380)
Accession : YP_007833890.1
Strain : Roseburia intestinalis M50/1
Genome accession: NC_021040
Putative virulence/resistance : Unknown
Product : Transketolase, C-terminal subunit
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.1
Position : 4138643 - 4139584 bp
Length : 942 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGAAATAAAGAAAATTGCAACAAGAGAAAGCTATGGAAATGCTCTGGTAGAAGTGGGAAAAGAGCATGAAGACCT
GATCGTATTAGATGCGGACCTTGCAGGCGCAACAAAGACCGGAATTTTCAAAAAAGCGTTCCCGGAGCGCCACTGGGATG
TCGGTATCGCAGAGGCAAATATGACCGGCATCGCAGCAGGACTTGCAACCTGTGGAAAAGTGCCGTTTATCAGCTCTTTT
GCCATGTTTGCGGCAGGAAGAAACTTTGAGCAGGTGCGCAACTCGATTGGATATCCACATCTGAATGTCAAGATCGGTGC
AACTCACGCAGGTATCTCCGTTGGTGAGGATGGCGCAACCCATCAGTGCCTGGAGGATATCGCCCTGATGCGCACGATCC
CTGGCATGGTAGTCATCAACCCGGCGGATGATGTAGAGGCAAGAGCTGCCGTACACGCTGCATATGATCATGCAGGACCT
GTATATCTTCGTTTTGGCCGTTTACCGGTTCCTGTATTCAATGATGAGGCAACCTACAAATTTGAGATCGGCAAAGGAAT
TGTCTTAAAAGAAGGAAAAGATGTGACAATTTTTGCAACCGGACTCTGTGTGAATGAGACGGTAGAGGCAGAAAAAATGC
TTGCAAAAGACGGTATTGATGCAGAGATCATCAATATCCACACCATCAAACCGATCGACCGTGAACTGGTTGTAAAATCC
GCGTTAAAGACCGGAAAAGTCGTTACGGTTGAGGAACACTCTGTGATCGGTGGACTTGGAAGTGCGGTATGTGACGTGCT
CTGCGAAGAGGCTCCGACGAAAGTCTTAAAGATCGGTGTCAACGATGTATTCGGTGAGTCAGGTCCGGCATTAGAGCTGC
TTCATAAATATGAGCTTGATGCAGAGGGCATCTACAAAAAAGTAAAAGCATTTGTAAAATAA

Protein sequence :
MSEIKKIATRESYGNALVEVGKEHEDLIVLDADLAGATKTGIFKKAFPERHWDVGIAEANMTGIAAGLATCGKVPFISSF
AMFAAGRNFEQVRNSIGYPHLNVKIGATHAGISVGEDGATHQCLEDIALMRTIPGMVVINPADDVEARAAVHAAYDHAGP
VYLRFGRLPVPVFNDEATYKFEIGKGIVLKEGKDVTIFATGLCVNETVEAEKMLAKDGIDAEIINIHTIKPIDRELVVKS
ALKTGKVVTVEEHSVIGGLGSAVCDVLCEEAPTKVLKIGVNDVFGESGPALELLHKYELDAEGIYKKVKAFVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 1e-37 42