Gene Information

Name : PALO_11445 (PALO_11445)
Accession : YP_007872234.1
Strain : Propionibacterium avidum 44067
Genome accession: NC_021064
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2521431 - 2522267 bp
Length : 837 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGGCGCCGACCGCCGCTGCCGCCGATGAACTCGTCAAGACTTACGGAACCGGAGATGCCGTCGTCAAGGCCCTCGACGG
GGTGAGCGTCACCGTCGAGGTCGGTGCCCTCACCGCGGTCATGGGTCCGTCGGGATCGGGCAAATCGACGCTCATGCACT
GCATGGCCGGGCTCGACCGCCCCACCTCAGGCCGCGCCTTCATCGGCCAGACCGATGTCGCCACCCTCACCGACATGAAG
CTGACGCTGCTGCGACGTGAACGGGTCGGATTCATCTTCCAGCAGTTCAACCTCGTGCCAACCCTCACGGCCCGCGAGAA
CATCCTCCTGCCCCTGGCCATCGCCGGACGCAAGCCCGACCCGCAGTGGTGGGACACCGTCATCGACGTCGTCGGCCTGG
CCGACCGGCTCGACCACAAGCCCTCCGAGCTGTCAGGTGGGCAGCAGCAGCGCGTCGCCTGTGCGCGCGCCCTCGTGGGC
CGACCCGAGATCATCTTCGCCGACGAGCCCACCGGCAATCTGGACTCCATGAGTGCCACCGAGGTGCTCGGCTTCCTGCG
CCGGTCGGTCGACGAGTTCAGCCAGACCATCGTCATGGTCACCCACGACCCCGTCTCGGCCTCGTATGCCGACCGGGCGC
TCTTCCTTGCCGACGGGCGCATCGTCGACGACATCTGTCATCCCACCCATGACGCCGTGCTCACGACGATGGGCCGCCTG
GACCCGCGCCGCCACCCGTCGACCGACTCCGGGCCGGATGACGGCCCGTCCCCGCACCGGGCGAAGACAACCGGTGGCGA
GCACGTGCCGGCCGCCCGCCGTGTCGAAAGGCCCTGA

Protein sequence : 
MAPTAAAADELVKTYGTGDAVVKALDGVSVTVEVGALTAVMGPSGSGKSTLMHCMAGLDRPTSGRAFIGQTDVATLTDMK
LTLLRRERVGFIFQQFNLVPTLTARENILLPLAIAGRKPDPQWWDTVIDVVGLADRLDHKPSELSGGQQQRVACARALVG
RPEIIFADEPTGNLDSMSATEVLGFLRRSVDEFSQTIVMVTHDPVSASYADRALFLADGRIVDDICHPTHDAVLTTMGRL
DPRRHPSTDSGPDDGPSPHRAKTTGGEHVPAARRVERP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PALO_11445 YP_007872234.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-50 48
PALO_11445 YP_007872234.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-45 47
PALO_11445 YP_007872234.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-34 46
PALO_11445 YP_007872234.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-40 44