Gene Information

Name : RORB6_08805 (RORB6_08805)
Accession : YP_007874002.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1946229 - 1946747 bp
Length : 519 bp
Strand : +
Note : COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

DNA sequence :

ATGTCTCAGCTTTCCGCCACCACGCCGTTCACGCTCGCGTCTCTGTATCAAGCCCATCACGGCTGGCTGACAACCTGGTT
AACCGGCAAGCTGCAATCCGCCTTTGACGCCGATGATGTCACTCAGGATACCTTTCTGCGCGTGATGGGCAGCGAATCGC
TGACGGCGATCCGCGATCCTAGATCCTTCCTGTGCACCATCGCCAGACGGGTGATGATCGATCTGTTTCGCCGTAACGCG
CTGGAACGCGCGTGGCTGGAGATGCTTGCCCAGCTTCCGCAGGCCCTGGTCCCTTCGCCGGAGCGACAGCACATCCAGCT
GGAGACGCTGCAGCAGGTCGATGCCATGCTTGATGGCCTGAGCCGGAAAGCCCGCGCGGCCTTTTTGCTTTCGCAGCTGG
AGGGGCTGACGTATGCCGAGATTGCCGAACGCCTGATGGTATCGGTCAGCTCAGTAAAAAAATACGTCGCCAGAGCGACT
GAGCACTGCCTGCTTTTTCGCCTGGAGAATGGCCTGTGA

Protein sequence :

MSQLSATTPFTLASLYQAHHGWLTTWLTGKLQSAFDADDVTQDTFLRVMGSESLTAIRDPRSFLCTIARRVMIDLFRRNA
LERAWLEMLAQLPQALVPSPERQHIQLETLQQVDAMLDGLSRKARAAFLLSQLEGLTYAEIAERLMVSVSSVKKYVARAT
EHCLLFRLENGL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	2e-57	72

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
RORB6_08805	YP_007874002.1	RNA polymerase sigma factor FecI	VFG1049	Protein	7e-58	72