Gene Information

Name : RORB6_09085 (RORB6_09085)
Accession : YP_007874058.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2006540 - 2007241 bp
Length : 702 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAATAAGATCCTGCTGCAATGCGACAATCTGTGCAAACGCTATCAGGAAGGCACTGTGCAAACCGACGTGTTGCACAA
TGTCAGCTTCAGCATTGAGGAAGGGGAGATGATGGCGATTGTCGGTACCTCGGGTTCCGGGAAAAGTACGCTGCTCCATC
TGCTCGGCGGACTGGATACGCCGACCTCCGGCGATGTGATCTTCTCCGGGCAGTCGATGAACCGGCTCTCTGCGGCCGCG
CGAGCCGACCTGCGTAACCGTGAACTGGGTTTTATCTATCAGTTCCACCACCTGTTGCCGGATTTCACCGCCCTTGAAAA
CGTGGCAATGCCGCTGCTGATTGGCAAACAGAAAGCAGCGGATATTGAACGTCAGGCTAAGGCGATGCTGCATGCCGTGG
GGCTGGAACACCGCAGCAACCACCGCCCGTCAGAGCTATCCGGCGGCGAGCGCCAGCGGGTGGCGATTGCCCGGGCGCTG
GTCAACAAGCCGCGGCTGGTGCTGGCGGATGAGCCGACCGGTAACCTCGATGCCCGCAACGCCGACAGTATTTTTCAGCT
GCTGGGGGAACTGAACGTTGCCCAGCGCACCGCTTTTCTGGTGGTGACCCACGACCTGCAACTGGCCAAACGGATGAATC
GCCAGCTGGAGATGCGTGATGGCCATCTGGACGCGGAACTGACCCTGATGGGGGCCAGGTAA

Protein sequence : 
MNKILLQCDNLCKRYQEGTVQTDVLHNVSFSIEEGEMMAIVGTSGSGKSTLLHLLGGLDTPTSGDVIFSGQSMNRLSAAA
RADLRNRELGFIYQFHHLLPDFTALENVAMPLLIGKQKAADIERQAKAMLHAVGLEHRSNHRPSELSGGERQRVAIARAL
VNKPRLVLADEPTGNLDARNADSIFQLLGELNVAQRTAFLVVTHDLQLAKRMNRQLEMRDGHLDAELTLMGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-27 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_09085 YP_007874058.1 lipoprotein releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 2e-34 47
RORB6_09085 YP_007874058.1 lipoprotein releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 9e-40 44