Gene Information

Name : RORB6_12075 (RORB6_12075)
Accession : YP_007874650.1
Strain : Raoultella ornithinolytica B6
Genome accession: NC_021066
Putative virulence/resistance : Virulence
Product : outer membrane receptor FepA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2638685 - 2640925 bp
Length : 2241 bp
Strand : +
Note : COG4771 Outer membrane receptor for ferrienterochelin and colicins

DNA sequence :
ATGAATAACAAGATCAAATCTTTGACCTTGCTGGTCAATCTGGGAATTTATGGGGTCGCCTTCCCGCTGTGTGCGGAAGA
GACCCTCGACAGTAAAAAAACGGCTACCGAAGAGACGATGGTGGTTACTGCCGCCGAACAAAACCTGCAGGCGCCGGGCG
TATCGACGATCACCGCCGAGGAAATTCGTAAACGTCCCCCCGCTCGCGATGTCTCCGAAATTATCCGCACCATGCCGGGC
GTTAACCTGACCGGCAACTCCACCAGCGGCCAGCGCGGTAACAACCGCCAGATTGATATCCGCGGCATGGGCCCGGAAAA
TACCCTGATCCTGATTGATGGCAAACCGGTCACCAGCCGTAACTCCATCCGCCTGGGCTGGCGCGGCGAGCGCGATACCC
GCGGCGATACCAACTGGGTCCCACCGGAGCTGATTGAGCGCATTGAAGTCATTCGTGGACCGGCGGCGGTACGCTACGGC
AACGGCGCCGCGGGCGGCGTGGTCAATATCATCACCAAAAAAGGTGATAACGAGTGGCACGGTTCATGGAACACCTACAT
GAACGCCCCGGAGCACAAAGATGAAGGCTCCACCAAACGCACCAACTTCAGCCTGAACGGCCCGCTGGGCGGCGACTTCA
GTTTCCGCCTGTTAGGCAACCTCGATAAAACCCAGGCCGATGCCTGGGATATCAACCAGGGTCATCAGTCAGAACGTACC
GGTATTTACGCCGATACGCTACCGGCCGGCCGTGAAGGGGTGGAGAACAAAAATATCAACGGCGTCGTACGCTGGGATTT
TGCACCGATGAACTCGCTGGAGTTTGAGGCGGGCTACAGCCGCCAGGGCAACCTGTACGCCGGGGATACGCAGAACACCA
ACACCAACGATCTGGTGAAAAAAAATTACGGCAAAGAGACCAACCGTCTCTATCGCCAGACCTACTCGGTGACCTGGAAC
GGCGGCTGGGATAACGGCATCACCACCAGCAACTGGGCGCAGTACGAGCACACCCGCAACTCGCGTAAAGGCGAAGGCCT
GGCCGGGGGCACGGAAGGGATTTTCAGCAGCGATCAATTCTCTGATATCGACCTGTCCGACGTGATGCTGCACAGTGAAG
TCAGCGTTCCGTTCGACCTGTGGGTCAATCAGAACCTGACGCTGGGTACCGAATGGAACCAGCAGCGGATGAAGGATCTG
GCCTCCAACACCCAGACCTTTATGGGCGGCGACATTCCGGGTTTTACAAGCACCGGCCGCAGCCCGTATTCTCAGGCGGA
GATCTTCTCACTGTTTGCTGAAGACAACATCGAGCTGACCGACTCCACCATGCTGACCCCGGCGCTGCGCTTTGACCACC
ACAGCATTGTGGGGAACAACTGGAGCCCGTCGCTTAACCTGTCTCAGGGGCTCGGGGATGACTTCACCCTGAAAATGGGC
ATCGGCCGCGCCTATAAAGCGCCGAGCCTGTACCAGACCAACCCGAACTACATTCTGTACAGTAAAGGCCAGGGCTGTTA
TGCCAGCGCAACCGGCACCGGTTGCTATATGATGGGTAACGAAGACCTGAAAGCGGAAACCAGCATCAACAAAGAGATCG
GCCTTGAGTTTAAACGCGACGGCTGGCTGGCGGGCGTGACCTGGTTCCGTAACGACTACCGCAACAAGATTGAAGCTGGC
TATGCACCGATCTCCCAGACCGGTACGAGTAAAGTGAAAACCGATATTTACCAGTGGGAAAACGTACCGAAAGCGGTAGT
AGAAGGCCTGGAAGGAACATTGAACGTCCCGGTTAGCGAAACCGTTAACTGGACCAACAATATCACCTACATGCTGCAGA
GTAAGAACAAAGAGACCGGCGACCGTCTGTCGATTATTCCGGAATATACGCTGAACTCAACGCTGAGCTGGCAGATATAC
CAGGATGTTTCGGTGCAGTCGACCTTCACCTGGTACGGCAAGCAGGAACCGAAGAAGTATAACTACAAAGGTCAGCCGGT
CACCGGCAGCGAGAAGAACGAGGTGAGCCCGTACAGCATCCTCGGTCTGAGCGCGACCTGGGACGTCACCAAATACGTCA
GTCTGACCGGCGGCGTGGATAACGTCTTCGACAAGCGCCACTGGCGCGCGGGTAATGCCCAGACCACCGGCGGCGATACC
GGTTATATGTACGGCGCGGGCGCCGAAACCTATAACGAATCGGGCCGGACCTGGTACATGAGCGTCAACACGCAGTTCTG
A

Protein sequence :
MNNKIKSLTLLVNLGIYGVAFPLCAEETLDSKKTATEETMVVTAAEQNLQAPGVSTITAEEIRKRPPARDVSEIIRTMPG
VNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSIRLGWRGERDTRGDTNWVPPELIERIEVIRGPAAVRYG
NGAAGGVVNIITKKGDNEWHGSWNTYMNAPEHKDEGSTKRTNFSLNGPLGGDFSFRLLGNLDKTQADAWDINQGHQSERT
GIYADTLPAGREGVENKNINGVVRWDFAPMNSLEFEAGYSRQGNLYAGDTQNTNTNDLVKKNYGKETNRLYRQTYSVTWN
GGWDNGITTSNWAQYEHTRNSRKGEGLAGGTEGIFSSDQFSDIDLSDVMLHSEVSVPFDLWVNQNLTLGTEWNQQRMKDL
ASNTQTFMGGDIPGFTSTGRSPYSQAEIFSLFAEDNIELTDSTMLTPALRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMG
IGRAYKAPSLYQTNPNYILYSKGQGCYASATGTGCYMMGNEDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAG
YAPISQTGTSKVKTDIYQWENVPKAVVEGLEGTLNVPVSETVNWTNNITYMLQSKNKETGDRLSIIPEYTLNSTLSWQIY
QDVSVQSTFTWYGKQEPKKYNYKGQPVTGSEKNEVSPYSILGLSATWDVTKYVSLTGGVDNVFDKRHWRAGNAQTTGGDT
GYMYGAGAETYNESGRTWYMSVNTQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 2e-156 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RORB6_12075 YP_007874650.1 outer membrane receptor FepA VFG0923 Protein 0.0 80
RORB6_12075 YP_007874650.1 outer membrane receptor FepA VFG0935 Protein 9e-157 51
RORB6_12075 YP_007874650.1 outer membrane receptor FepA VFG1650 Protein 1e-156 51