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Name : secD (RORB6_13430) Accession : YP_007874919.1 Strain : Raoultella ornithinolytica B6 Genome accession: NC_021066 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2939618 - 2941465 bp Length : 1848 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACATCATGCTGGTCGTCGTTATTATCGTCGGCCTGATGTATGCGCTCCCCAA CCTGTATGGTGAGGATCCGGCCGTTCAAATCACTGGCGCGCGCGGTGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCC AGAAAACGTTACAAGAAGAAAAAATTACCGCTAAGTCTGTGGCACTGGAAGAGGGCGCAATCCTTGCGCGCTTCGACACC ACCGATGTCCAGCTGCGCGCACGTGAAGTGCTGGTGGACGTGTTAGGTGATAAATACGTCGTGGCGCTGAACTTAGCTCC GGCGACTCCTCGCTGGTTAGCGGCTATCCATGCCGAGCCGATGAAGCTGGGTCTTGACCTGCGCGGCGGCGTACACTTCC TGATGGAAGTGGATATGGACACCGCGCTGGGAAAACTGCAGGAACAAAATATCGATAGCCTGCGCAGCGAGCTGCGTGAA AAAGGCATCCCTTACTCCACCGTGCGTAAGGAAGACAATTATGGTCTGAGCATCGCTTTTCGCGATAGCGCCGCACGCGA TCAGGCCATCTCCTGGCTGAGCCCGCGTCACCGCGATCTGGTTATCTCCACGCAGGGCGCTACTGGCCTGAAAGCGGTGA TGACCGATGAGCGCCTGAAAGAAGCCCGCGAATACGCCGTGCAGCAGAACATCAACATTCTGCGTAACCGTGTTAACCAA CTGGGTGTTGCCGAGCCGCTGGTACAGCGTCAGGGCGCCGACCGTATCGTGGTTGAACTGCCGGGTATTCAGGATACCGC TCGGGCGAAAGAAATTCTTGGCGCTACGGCGACGCTGGAATTCCGTCTGGTTAACAGCAACGTTGACAGCGCCGCAGCCG CTTCCGGTCGTGTCCCTGGCGACTCTGAAGTGAAAGATACCCGTGAAGGTCGGCCGGTTGTGCTGTACAAGCGCGTGATT CTGACCGGTGACCATATCACCGACTCCACTTCCAGCATGGACGAGTTCAACCAGCCGCAGGTTAACATCTCGCTGGACAG CGCCGGCGGCAACATCATGTCTAACTTCACCAAGGACAACATCGGCAAACCGATGGCGACCCTGTTCGTGGAGTACAAAG ACAGCGGTAAGAAAGATGCCAACGGTCGTGCCATTCTGGTGAAAGAGGAAGAGGTGATTAACATCGCCAACATCCAGTCT CGCCTGGGTAACAGCTTCCGTATTACCGGTATCAGCAACCCAAATGAAGCGCGTCAGCTCTCTCTGCTGCTGCGTGCGGG TGCGCTGATTGCGCCGATTCAGATCGTTGAAGAACGTACCATCGGCCCGACTCTGGGTATGCAGAACATCAAGCAGGGTC TGGAAGCGTGTCTGGCCGGTCTGGTGGTGTCTATCCTGTTCATGATTTTCTTCTATAAGAAATTCGGTCTGATCGCGACC TCTGCGCTGGTGGCTAACCTGGTGCTGATCGTCGGTATCATGTCCCTGCTTCCTGGGGCCACGCTGAGTATGCCGGGGAT TGCGGGTATCGTGTTAACCCTTGCGGTAGCGGTCGATGCTAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGAGCA ACGGACGTTCCGTTCAGCAGGCGATTGATGAAGGTTACCGGGGCGCATTCAGCTCGATCTTCGATGCGAACATTACGACG TTGATCAAAGTTATCATCCTGTACGCGGTCGGTACCGGTGCAATTAAAGGGTTTGCGATTACTACCGGTATCGGTGTGGC AACCTCGATGTTTACCGCTATCGTCGGCACCCGTGCCATCGTGAACCTGCTGTACGGCGGCAAGCGCGTTAAAAAGCTGT CTATCTGA Protein sequence : MLNRYPLWKYIMLVVVIIVGLMYALPNLYGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDT TDVQLRAREVLVDVLGDKYVVALNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSELRE KGIPYSTVRKEDNYGLSIAFRDSAARDQAISWLSPRHRDLVISTQGATGLKAVMTDERLKEAREYAVQQNINILRNRVNQ LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSNVDSAAAASGRVPGDSEVKDTREGRPVVLYKRVI LTGDHITDSTSSMDEFNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILVKEEEVINIANIQS RLGNSFRITGISNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYKKFGLIAT SALVANLVLIVGIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRSVQQAIDEGYRGAFSSIFDANITT LIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-122 | 49 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-122 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-122 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-122 | 49 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-123 | 49 |
