Gene Information

Name : rrfE (MHH_c10500)
Accession : -
Strain : Mannheimia haemolytica M42548
Genome accession: NC_021082
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1002296 - 1003824 bp
Length : 1529 bp
Strand : +
Note : -

DNA sequence : 
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATGCAAGTCGAACGGTAGCACATAGGAGTTTGC
TCCTTGGGTGACGAGTGGCGGACGGGTGAGTAATGCTTGGGAATCTGGCTTATGGAGGGGGATAACTACTGGAAACGGTA
GCTAATACCGCGTAATGTCTTAGGACTAAAGGGTGGGACCATTTGGCCACCTGCCATAAGATGAGCCCAAGTGGGATTAG
GTAGTTGGTGAGGTAAAGGCTCACCAAGCCCGCGATCTCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGA
CACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGGGAACCCTGATGCAGCCATGCCGCGTG
AATGAAGAAGGCCTTCGGGTTGTAAAGTTCTTTCGGTGACGAGGAAGGCGATTGTTTTAATAGAACAGTCGATTGACGTT
AATCACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTAATCGGAATAACTG
GGCGTAAAGGGCACGCAGGCGGTTGTTTAAGTGAGGTGTGAAAGCCCCGGGCTTAACCTGGGAATTGCATTTCAGACTGG
ACAACTAGAGTACTTTAGGGAGGGGTAGAATTCCACGTGTAGCGGTGAAATGCGTAGAGATGTGGAGGAATACCGAAGGC
GAAGGCAGCCCCTTGGGAATGTACTGACGCTCATGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC
ACGCCGTAAACGCTGTCGATTTGGGGATTGGGGTTTAACTCTGGTGCCCGTAGCTAACGTGATAAATCGACCGCCTGGGG
AGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCA
ACGCGAAGAACCTTACCTACTCTTGACATCCATGGAATCTTGTAGAGATATGAGAGTGCCTTCGGGAACCATGAGACAGG
TGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCTTTGTTGC
CAGCGATTAGGTCGGGAACTCAAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGC
CCTTACGAGTAGGGCTACACACGTGCTACAATGGCGTATACAGAGGGCGGCGAGCCAGCGATGGGGAGCGAATCTCAGAA
AGTACGTCTAAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAAATCAGAATGTTG
CGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGTACCAGAAGTAGATAGCTTAAC
CGAAAGGGGGGCGTTTACCACGGTATGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTT
GGATCACCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-129 87.2
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-129 87.2
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-152 86
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-152 86
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-152 85.7
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-152 85.7