Gene Information

Name : AvCA_01100 (AvCA_01100)
Accession : YP_007891164.1
Strain : Azotobacter vinelandii CA
Genome accession: NC_021149
Putative virulence/resistance : Virulence
Product : ECF sigma factor, FecI family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 112066 - 112596 bp
Length : 531 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGACCCCCGATACTTCCTATCCGCAACAGGTAGCGGACTACTATGCCGAGCACCATGGCTGGATACGCGCCTGGCT
GCACCGGAAACTGGGCAACGCCTGCGACGCCGCCGACCTGGCCCACGAGGTGTTCCTGCGGTTGCTGGCTAGGCCGCGCC
GGTTCGACAGCGACGGCCATGCGCGCGCCTATCTGCACGGTATGTCCCATCATGTCTGCGTGGATTTCTGGCGGCGCCGG
CAGGTCGAGCAGGCCTGGCTGGAGGTCCTGGCCAGTCGTCCCGAAACCTTCGCGCCTTCGGAAGAGTACCGGGCAATAGT
GCTGGAGGCCCTGCAGCAGGTGCACGCGATGCTCTCCCGCCTGCCGGAGCGGGTCGCCGAGGCCTTCCTCCTGGCCCAGC
TCCAGGGACTGGGCTACAAGGCCATCGGCGAACGCCTGGGGGTGTCCGAACGGACCGTGACCAAGTACATGGCCCAGGCG
ATGTACCAGTGCCTGCTGCTCGAGGCCGAACTCGATGAAGCCCTCGTCTGA

Protein sequence : 
MSTPDTSYPQQVADYYAEHHGWIRAWLHRKLGNACDAADLAHEVFLRLLARPRRFDSDGHARAYLHGMSHHVCVDFWRRR
QVEQAWLEVLASRPETFAPSEEYRAIVLEALQQVHAMLSRLPERVAEAFLLAQLQGLGYKAIGERLGVSERTVTKYMAQA
MYQCLLLEAELDEALV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-28 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AvCA_01100 YP_007891164.1 ECF sigma factor, FecI family VFG1049 Protein 2e-28 45