Gene Information

Name : AvCA_22650 (AvCA_22650)
Accession : YP_007893241.1
Strain : Azotobacter vinelandii CA
Genome accession: NC_021149
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor, ECF subfamily
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2262071 - 2262595 bp
Length : 525 bp
Strand : -
Note : -

DNA sequence :

ATGACCGCCTCCTCGCAAGTCTCCCCCGCACTGCGCCTCCAGGTTCTCCATCGCCTGTTCGGCGAGCATCACGGCTGGCT
GTTCGGGCGGTTGCGCGCCCGGCTCGGCTGCGCCCACGACGCCGCCGACATCGCCTCGGAAACCTTCACCCAGGTGGTCG
CCCTGGACGATCCCGGCGCCATCCGCGAGCCGCGCGCCCTGCTCACCACCATCGCCAAGCGCCTGATCTACGCCAGTTGG
CGCCGCCGCGACCTGGAACGCGCCTACCTGGAAGTCCTGGCGCAGCAGCCGGAGGCCGTCCAGCCTTCTCCCGAGGAAAC
CGTCCTGGCCCTGGAAGCCCTGGCGGCCATCGACCAGTTGCTCGACGGGCTGTCCCCGAAGGCCCGCGCGGCCTTTCTCT
ACAGTCAACTGGAAGGCTTGAACTATACGGAGATCGCCAGCCGCCTGGGCGTATCCGTCACCCGCGTGCACCAGTACGTG
GTCAAGGGGCTGACCACCTGCTACCTGGCGCTCGAAGCGGCATGA

Protein sequence :

MTASSQVSPALRLQVLHRLFGEHHGWLFGRLRARLGCAHDAADIASETFTQVVALDDPGAIREPRALLTTIAKRLIYASW
RRRDLERAYLEVLAQQPEAVQPSPEETVLALEALAAIDQLLDGLSPKARAAFLYSQLEGLNYTEIASRLGVSVTRVHQYV
VKGLTTCYLALEAA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	4e-31	47

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
AvCA_22650	YP_007893241.1	RNA polymerase sigma factor, ECF subfamily	VFG1049	Protein	2e-31	47