Gene Information

Name : rnhA (AvCA_29600)
Accession : YP_007893911.1
Strain : Azotobacter vinelandii CA
Genome accession: NC_021149
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3058018 - 3058476 bp
Length : 459 bp
Strand : -
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
GTGAGCGACAAGGTCGAGATCTATACCGATGGAGCCTGCAAGGGCAACCCCGGTCCCGGGGGCTGGGGCGCGCTGCTGGT
CTGCCAGGGCGTCGAGCGCGAGCTCTGGGGCGGCGAGGCGGAAACCACCAACAACCGCATGGAGCTGACCGCGGCCATCC
GCGCGCTGGCCGAACTCAAGCGGCCTTGCGAGGTGCACCTGACCACCGACTCCGAATACGTGATGCGCGGAATCCTGGAG
TGGCTGCCGAACTGGAAGAAGCGCGGCTGGAAGACCGCCGCGCGCCAGCCGGTGAAGAACGCCGATCTCTGGCAGCAGCT
CGACGAGCAGGTCGGCCGCCATCGGGTCACCTGGGGCTGGGTGCGCGGGCATACCGGCCATCCCGGCAACGAACGCGCCG
ATCTGCTGGCCAACCGCGGCGTCGCCGCCGCCCGCGCGCAGAAGAAACACGGCGTCTAG

Protein sequence :
MSDKVEIYTDGACKGNPGPGGWGALLVCQGVERELWGGEAETTNNRMELTAAIRALAELKRPCEVHLTTDSEYVMRGILE
WLPNWKKRGWKTAARQPVKNADLWQQLDEQVGRHRVTWGWVRGHTGHPGNERADLLANRGVAAARAQKKHGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 4e-36 55