Gene Information

Name : AvCA_47170 (AvCA_47170)
Accession : YP_007895606.1
Strain : Azotobacter vinelandii CA
Genome accession: NC_021149
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor, FecI family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4789855 - 4790337 bp
Length : 483 bp
Strand : +
Note : -

DNA sequence :

GTGCTGCACAGCCTCTACCTGGACCATCGCCTCTGGCTCAACGGCTGGCTCAGGCGCCGCCTGAGCTGCCCGCACAGCGC
CGACGACCTGACCCAGGACGCCTTCGTGCAGGTCATGGGCTCCCGCGATCTGCTGCGCCTCGAACAGCCGCGGGCTTTCC
TGACCACCATCGCCAAGCGGCTGCTGTTCAACCACTACCGCCGCCAGGATATCGAGCGCGCCTATCTCGAAGCCCTGGCC
GCGCTTCCCGCGGCGGAGCAGCCGAGCGAGGAAGTCCGCGCCATCGCCATGGAGACCCTGTTGGAGCTGGCGCGGCTGCT
CGAGGACCTGCCGCTGCCGGTCCGCCAGGCGTTCCTCTACGCCCAGCTCGACGGCCTGTCCTATGCCGAGATCGCCGCGC
GCCTCGGCATCTCCCTGGCCACGGTCAAGCGCTACATCGCCAAGGCGGCGCAGCGCTGCTACTTCGCCGAGTCGTACGAA
TGA

Protein sequence :

MLHSLYLDHRLWLNGWLRRRLSCPHSADDLTQDAFVQVMGSRDLLRLEQPRAFLTTIAKRLLFNHYRRQDIERAYLEALA
ALPAAEQPSEEVRAIAMETLLELARLLEDLPLPVRQAFLYAQLDGLSYAEIAARLGISLATVKRYIAKAAQRCYFAESYE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	2e-17	49

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
AvCA_47170	YP_007895606.1	RNA polymerase sigma factor, FecI family	VFG1049	Protein	8e-18	49