Gene Information

Name : AvCA6_17710 (AvCA6_17710)
Accession : YP_007897818.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Virulence
Product : sigma factor, FecI family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1758707 - 1759219 bp
Length : 513 bp
Strand : -
Note : -

DNA sequence :
GTGCCGACGACTTCCGATCCGAACGCCCTGCTGGCAACGCTCTACCGGGAAAACCATCGCTGGCTGCGCGGCTGGCTGAG
CCGGCGACTACAGTGTCCCCAGGATGCGGCCGACCTGACCCAGGATACCTTTCTGCGTGCCCTGAATTCCCGACAGTTGG
AACAGATCCAGGAACCGCGGGCCTTCCTGGGCACCCTGGCCAAACGCCTGCTGTGCAACCTCTGGCGGCGGCGGCAACTG
GAGCGCAGCTATCTCGACGCCCTCGCCCAATTGCCGGAACGCTTCGCACCTTCCGAGGAAGATATCGCGCTGGTCCGCGA
GGCCATCGAAGCCATCGACCGGTTACTGGACGGCCTGCCCCTGCGCGCCCGCCGAGCCTTCCTGCTCAACCGGCTGGACG
GCCTCGGCCAACAGGCCATCGCCGAGCGGCTGGGCGTCTCCCTGGCAACGGTCGAACGCGACCTGCGACGCGCCTACATC
CACTGCCTGACGCGGGACCCCGAACAGCCATGA

Protein sequence :
MPTTSDPNALLATLYRENHRWLRGWLSRRLQCPQDAADLTQDTFLRALNSRQLEQIQEPRAFLGTLAKRLLCNLWRRRQL
ERSYLDALAQLPERFAPSEEDIALVREAIEAIDRLLDGLPLRARRAFLLNRLDGLGQQAIAERLGVSLATVERDLRRAYI
HCLTRDPEQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-26 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AvCA6_17710 YP_007897818.1 sigma factor, FecI family VFG1049 Protein 8e-27 45