Gene Information

Name : AvCA6_21550 (AvCA6_21550)
Accession : YP_007898185.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Virulence
Product : ECF sigma factor, FecI family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2156087 - 2156614 bp
Length : 528 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGATGCCATCCGCGACGCAGCCGAGCCGCCCCATCGGGCGGTCGGCCTGCTCTACCAGAATCATCACACCTGGTT
GGTCGGCTGGCTGCGCCGCCGGATGGACTGCTCGCACAGCGCCGCCGACCTGGCCCAGGACACCTTCGTGCGCCTGATCG
GCGGCAGCCTGCCCGAACTGCGCGAGCCCCGGCATTATCTGGTCACCGTGGCCAAGCGCGTGCTGATCGACCACTTCCGC
CGGCGCACCCTCGAGCGCACCTATCTGGACGCCCTGGCCCGGCAGCCCGAAGCGGAAGAAGTATCCCCGGAAGTCCGCCT
GCAGATCGTGGAAACCCTGCTCGCCCTGGATGCCATGCTGCTGGGGTTGGGCCACAAGCCGCGCCAGGCTTTCCTCATGT
CCCAGTTGCTGGGAATGAACTACGCCGAGATCGCCGAACGCCTCGGCGTTTCGGTCAGCTCGGTGACCAAATATATCGCC
AGGGCTACCGAACAATGCCTGCTGTTCGCCCTCGACGCGGACCTCTGA

Protein sequence :
MSDAIRDAAEPPHRAVGLLYQNHHTWLVGWLRRRMDCSHSAADLAQDTFVRLIGGSLPELREPRHYLVTVAKRVLIDHFR
RRTLERTYLDALARQPEAEEVSPEVRLQIVETLLALDAMLLGLGHKPRQAFLMSQLLGMNYAEIAERLGVSVSSVTKYIA
RATEQCLLFALDADL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-36 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AvCA6_21550 YP_007898185.1 ECF sigma factor, FecI family VFG1049 Protein 2e-36 53