Gene Information

Name : AvCA6_02250 (AvCA6_02250)
Accession : YP_007896321.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor, FecI family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 217624 - 218127 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence :

ATGTCGAGTCCGACGAGCGGCAAGCTGGAATCCTTTTTCAACAGCCACCACCACTGGCTGCTCCGGCACGTGCAACGCCA
GTTGAGCAACCGGGCCGACGCGGAAGACACCGCATCGGAAACCTTCTGCCAGGTGTTGAGCTCCCGTATCGACACGGACG
AAATCCAGCAACCCCGCGCCTACCTGTCGACCATTGCGCGCCGCCTGATGTTCGACCGCTACCGGCGGCGTCAACTGGAG
AAAACCTATCTCGACTATCTGGCCACGCTTCCCGAAGGGCTGGCGCCCTCAGCGGAAGAAAGAACGCTGCTGCAGGAAGC
CCTGACGCTGATCGACCGAACCCTGGACGGCCTCCCGCTGGCGGTGAAAACGGCCTTCCTCTATAGCCAGATCGATGGCC
TCGGCTATACCGAGATCGCGCAATTGCTGGGTGTTTCCGAACGCACGGTCAGGCGCTACATGAAACAGGCCTTGAGCCAC
TGCTACCTGATCGATCTTCCATGA

Protein sequence :

MSSPTSGKLESFFNSHHHWLLRHVQRQLSNRADAEDTASETFCQVLSSRIDTDEIQQPRAYLSTIARRLMFDRYRRRQLE
KTYLDYLATLPEGLAPSAEERTLLQEALTLIDRTLDGLPLAVKTAFLYSQIDGLGYTEIAQLLGVSERTVRRYMKQALSH
CYLIDLP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-29	47

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
AvCA6_02250	YP_007896321.1	RNA polymerase sigma factor, FecI family	VFG1049	Protein	4e-30	47