Gene Information

Name : AvCA6_40940 (AvCA6_40940)
Accession : YP_007900060.1
Strain : Azotobacter vinelandii CA6
Genome accession: NC_021150
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor, FecI family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4130228 - 4130728 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence : 
ATGCCCGTTCAGCCTCCCGGCCCCTTCCACACCCTCTACAGCCAGCATCACGACTGGCTGAAAGGCTGGCTGCGCAGCCG
CATCGGCAACACCAGCGACGCCGCCGACCTGGCCCAGGACACCTTCATGCGCGTGCTGGCGAACCGTAACGCCGACGGCA
TCCGCGAGCCGCGCACCTACCTGAGCACCATCGCCCGCGCCCTGCTGATCGACCACTTCCGCCGCCAGAGCATCGAGCGC
GCCTACCTGGAAGCACTGGCCGCGCGCCCCGAGCCGCTGGCCATCTCCCCCGAGACGCGGCTGGCCATCCTGGAAACCCT
CACCGCCATCGACGCCATGCTCGATGGACTGGGCGAACGCACCCGCGCGATCTTTCTCGCCGTCCAGCTCGAAGGGCTCG
GCTACGCAGCCGTGGGCGAACGCCTCGGCGTCTCGGTCACCACCGTGAAAAAACACCTGATCCGCGCCATGACCCACTGT
CTGCTGCTGATGGACGACTGA

Protein sequence : 
MPVQPPGPFHTLYSQHHDWLKGWLRSRIGNTSDAADLAQDTFMRVLANRNADGIREPRTYLSTIARALLIDHFRRQSIER
AYLEALAARPEPLAISPETRLAILETLTAIDAMLDGLGERTRAIFLAVQLEGLGYAAVGERLGVSVTTVKKHLIRAMTHC
LLLMDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-34 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AvCA6_40940 YP_007900060.1 RNA polymerase sigma factor, FecI family VFG1049 Protein 2e-34 50