Gene Information

Name : STU288_06580 (STU288_06580)
Accession : YP_007902415.1
Strain : Salmonella enterica U288
Genome accession: NC_021151
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1331604 - 1331888 bp
Length : 285 bp
Strand : +
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGCAACAAGAAGCACTAGGAATGGTAGAAACCAAAGGCTTAACCGCAGCCATAGAGGCCGCTGATGCAATGGTTAAGTC
AGCCAATGTGATGTTAGTGGGCTATGAAAAGATTGGCTCCGGGCTGGTAACCGTCATCGTGCGCGGCGATGTTGGCGCGG
TCAAAGCGGCCACCGATGCAGGTGCCGCAGCCGCACGCAACGTGGGTGAAGTGAAAGCCGTACACGTCATCCCACGCCCT
CACACCGATGTAGAAAAAATCTTACCGAAGGGAATTAGCCAATGA

Protein sequence : 
MQQEALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRP
HTDVEKILPKGISQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 4e-13 68
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 65
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-12 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STU288_06580 YP_007902415.1 hypothetical protein VFG1596 Protein 1e-13 68
STU288_06580 YP_007902415.1 hypothetical protein VFG1598 Protein 9e-13 65
STU288_06580 YP_007902415.1 hypothetical protein VFG1597 Protein 1e-12 63