Gene Information

Name : HYPDE_29388 (HYPDE_29388)
Accession : YP_007914052.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Unknown
Product : protein-export membrane protein SecF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1345061 - 1346023 bp
Length : 963 bp
Strand : +
Note : COG0341 Preprotein translocase subunit SecF

DNA sequence :
TTGATTCCGGTCTTCAAGGGCGCCGACTTCTTTCCCCACGACCTGAACCTGCCGTTCATGAAATTCAAGGGGCCGGCGCT
GGCACTGTCGATCATCGCGATGGCGATCTCGATTGTGCTTTGCGCAACGATGGGACTGAACTACGGCGTCGACTTCAAAG
GCGGTTCGCTGATCGAACTCAAAACGAAAAGCGGCAATGCCGATATCGGTGTGCTGCGTGAGAAGCTGAACAGCATTGGG
GTCGGCAACGTCCAGATCCAGGAGTTTGGCACACCCGACGACGTGCTCGTTCGTCTTGAAGAGCAGCCGGGTGGCGAGGC
GGCGCAGCAGGCGGCATTGAAGAAGGTCGTCGATGCAACGTCAGCGGATTATGTGGAGCGTCGCGTCGAAGTCGTCGGAC
CCGCGGTATCGAGCGAATTGCGCATGACGGGCTTCATTGCGGTCGCGGCGGGCATTCTGGCGATCGTGGCTTACGTCTGG
TTCCGGTTCGAATGGCAGTTCGCGCTGGGCGCAGTTGTGGCGCTGTCGCACGACGTTCTTGTAACGGCCGGTATCTTCGC
GCTGTTTCAGTTCGAGTTCGACCTGTCGACGGTCGCGGCTCTTTTGACCATTCTCGGCTATTCGGTGAACGACACCGTCG
TCGTGTCGGACCGTATCCGCGAGAACCTGCGCAAGTTCAAGAAAATGGAACTCAACGAGCTCTTGAACCTGTCGATCAAC
GAAACGCTGTCGCGCACGATCCTGACCGGCATGACGGCACTCGCGGTGCTCATCTCGCTCTATATTTTCGGCGGCGAGGT
GATCCGGAATTTCAACTTCGCGATGCTACTTGGCGTGGTGATCGGAACCTATTCGTCGATCTTCATCGCAGCGCCGCTGC
TCGGCTATCTGGGCGTCAAGCGCGATTGGAGTGACATGGCGGCAAAGGCCGTGGCCGCGACAAAGTCGAAAGCCAAGGCC
TGA

Protein sequence :
MIPVFKGADFFPHDLNLPFMKFKGPALALSIIAMAISIVLCATMGLNYGVDFKGGSLIELKTKSGNADIGVLREKLNSIG
VGNVQIQEFGTPDDVLVRLEEQPGGEAAQQAALKKVVDATSADYVERRVEVVGPAVSSELRMTGFIAVAAGILAIVAYVW
FRFEWQFALGAVVALSHDVLVTAGIFALFQFEFDLSTVAALLTILGYSVNDTVVVSDRIRENLRKFKKMELNELLNLSIN
ETLSRTILTGMTALAVLISLYIFGGEVIRNFNFAMLLGVVIGTYSSIFIAAPLLGYLGVKRDWSDMAAKAVAATKSKAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96066.1 SecF Not tested T-PAI Protein 2e-36 44
secF AAT96102.1 SecF Not tested T-PAI Protein 6e-36 43