|
Name : HYPDE_32003 (HYPDE_32003) Accession : YP_007914574.1 Strain : Hyphomicrobium denitrificans 1NES1 Genome accession: NC_021172 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 1879151 - 1881136 bp Length : 1986 bp Strand : - Note : COG1138 Cytochrome c biogenesis factor DNA sequence : GTGATCGTCGAGTTCGGACATTTCGCTTTGATCCTGGCGCTTCTCGTCGCCGTCGTGCAGGTCGTTCTGCCGATGGCCGG CGCGTCTCTCAAAGACGAGCGGATGATGCGCGTTGCCGAACCTGCTGCCGTCTCTCAGTTCATCCTGCTTGCAATCGCAT TCGTGGCGTTGATGCACGCTTATGTGACGTCGGATTTCTCGGTTGCGAACGTCGCCGAGAATTCTCATTCGACGAAGCCG CTCATCTATAAGATGGCCGGCGTCTGGGGCAACCACGAAGGCTCGATGCTGTTGTGGGTGCTGATCCTGGCGCTTTTCGG CGCTGCCGTCGCGATGTTCGGCAACAATCTGCCGCCCACGTTGAAAGCCCGTGTGCTTTCCGTGCAGGCGTCGATCGCGG TCGCTTTCCTGCTTTTCACGCTCCTGACGTCGAACCCTTTTCTCCGTCTCGATCCGGCGCCGTCCGATGGCCGCGGATTA AACCCGATTCTGCAAGACCCGGCGCTCGCGTTCCATCCGCCGTTTCTCTATACCGGATACGTCGGCTTCTCGATTGCGTT CTCCTTTGCCATCGCTGCGCTGATCGAGGGGCGCATCGATGCCGCGTGGGCGCGCTGGGTGAGGCCGTGGACGCTCGCCG CGTGGATGTTTCTGACGATCGGCATTTCGATGGGCTCGTGGTGGGCGTACTACGAGCTCGGATGGGGCGGCTGGTGGTTC TGGGACCCCGTTGAGAACGCCTCCTTCATGCCGTGGCTCGCAGGGACGGCGCTTCTGCACTCCGCGCTCGTGATGGAGAA GCGCGAGGCCCTCAAGGTCTGGACGATCCTGTTGGCGATTCTGACATTCTCATTGTCGCTGATGGGAACGTTCATCGTCC GCTCGGGCGTCTTGACGTCGGTGCATTCGTTCGCCGTCGATCCGGCACGCGGCATTTTCATTTTCGCAATCCTGATTTTG TTCACCGGCGGCGGCCTGGCGCTCTTCGCGCTCAGGGCCAGCGAGATGCAAACCGGCGGGCTCTTTCAGCCGATCAGCCG TGAGGGCAGCCTCGTGCTGAATAACCTGCTGCTCGTGACCGGCGCGGCGACGGTGCTCGTCGGCACGCTTTATCCGATGG CGCTTGAAGGCTTGACGGGCGAGAAAATTTCGGTTGGACCGCCGTTCTTCAACTCGACGTTCGGTCCGCTGATGGTGCCG CTGCTGCTGGCGCTTCCCATCGGTCCGATGCTCGCATGGAAGCGCGGCGATCTCGTCGGTGCCATGCAGCGCCTGGCGTT CGCGGTGCTGGCTGCGATCGTTGCGATTGTCGCCTTCTTCGCTGTGGGGCATCGCGGACCGTGGCTTGCGCCCCTCGGTA TCGGCGTCGGCGTCTACGTCATGATGGGTGCGCTCAGCGAATGGGCGAACCGCGTCAAGCTCGGCCAAGCTTCACGCGCC GAGATTTTTCGCCGTGTACGAAATCTCCCTCGTTCCGCCTACGGCACGCTGCTCGCGCATTTCGGTATCGGCATGCTCGT CGTCGGCATTGTCGCAACGAGCGCCTACCGCGAGGAGCACATCCTCGTCATGAAGCCCGGTCAGACTCTTTCGGTCGCGG GCTACGACGTGACGTTCACCGGAGTCGAAAGCGGACGCGGTCCGAATTATCGCGAGGACTTCGCCGACTTTGACGTCAAG CGCGACGGCACATCGGTGACGCGCCTGACACCGTCGAAGCGACTCTACGATGCCCCGCCGCAGCCGACGACGGAGGCGGG CATTCATGCGGCTTGGCGCGGCGATCTCTATCTCGTCATCGGCGATCCCCAGCCAGGCGGCGGCTACGCCGTTCGCGCCT ACTTCAACCCGCTCGTGCGGTTTATCTGGCTCGGCGCGCTGATCATGTTCATCGGCGGCGGCATCTCGCTGTCCGACCGG CGGTTGCGCATCGGCGTTCCGGCCGGCCGCGCTCGGCGGCAGCCCGTTGCCGTTCCTGCGGAGTAA Protein sequence : MIVEFGHFALILALLVAVVQVVLPMAGASLKDERMMRVAEPAAVSQFILLAIAFVALMHAYVTSDFSVANVAENSHSTKP LIYKMAGVWGNHEGSMLLWVLILALFGAAVAMFGNNLPPTLKARVLSVQASIAVAFLLFTLLTSNPFLRLDPAPSDGRGL NPILQDPALAFHPPFLYTGYVGFSIAFSFAIAALIEGRIDAAWARWVRPWTLAAWMFLTIGISMGSWWAYYELGWGGWWF WDPVENASFMPWLAGTALLHSALVMEKREALKVWTILLAILTFSLSLMGTFIVRSGVLTSVHSFAVDPARGIFIFAILIL FTGGGLALFALRASEMQTGGLFQPISREGSLVLNNLLLVTGAATVLVGTLYPMALEGLTGEKISVGPPFFNSTFGPLMVP LLLALPIGPMLAWKRGDLVGAMQRLAFAVLAAIVAIVAFFAVGHRGPWLAPLGIGVGVYVMMGALSEWANRVKLGQASRA EIFRRVRNLPRSAYGTLLAHFGIGMLVVGIVATSAYREEHILVMKPGQTLSVAGYDVTFTGVESGRGPNYREDFADFDVK RDGTSVTRLTPSKRLYDAPPQPTTEAGIHAAWRGDLYLVIGDPQPGGGYAVRAYFNPLVRFIWLGALIMFIGGGISLSDR RLRIGVPAGRARRQPVAVPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-114 | 49 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-92 | 47 |
