Gene Information

Name : HYPDE_39583 (HYPDE_39583)
Accession : YP_007916084.1
Strain : Hyphomicrobium denitrificans 1NES1
Genome accession: NC_021172
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3376286 - 3377041 bp
Length : 756 bp
Strand : -
Note : COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component

DNA sequence :
ATGCAGACGCTGACGCAGCAACTGGCCAATCCGACGCGCTTCATGGGGCTTTCCGCGCGTGTTCTTCCTTGGGCATCGGG
CATTGCGGCCGGCCTGATCGCGGTTGGGATTTATCTCGCGTTCTTCGATTCTCCTGCTGACTATCAGCAGGGCGAGACCG
TTCGCATCATGTATATCCACGTGCCGTGCGCGTGGCTCTCGATGATGATCTACGGTCTGATTGCAATGTCGAGCTTCGGG
CTTCTCGTATTCAGACATCCCCTTGCCGACGTCTCGGCAAAAGCCGCTGCTCCACTCGGCGCGGCGTTTACGTTCTTGGC
CTTGCTGACGGGATCGCTCTGGGGCAAGCCCATGTGGGGCACCTATTGGGTCTGGGACGCGCGGCTGACGTCGGTGCTGA
TCCTCTTCTTCCTCTACCTCGGTCTGATTGCGCTCAGAGCCGCGCTCGAAGACGAATCCGCGGGTGCAAAACTGACCGCG
ATACTCGCACTTGTCGGTGTGACGATCCTCCCGATCATCAAGTTCTCGGTCAACTGGTGGAACACGCTGCATCAACCCTC
GACGGATTTTACCGCGACGGTCGATCCAAGCATGCGCTGGCCGCTGCTCGTGATGGCGCTGGGATTTACGGTGCTGTTCT
TCGCGATGCATTTGAAGGCCATGCGGAACGAGATTATGCGCAGGCGCGTGAAGGCCATGCGTGCCCAAGTCGTTGCCGGT
CGTGACCGCCTCGCCGCCTCGGGGGTTGCAAGCTAA

Protein sequence :
MQTLTQQLANPTRFMGLSARVLPWASGIAAGLIAVGIYLAFFDSPADYQQGETVRIMYIHVPCAWLSMMIYGLIAMSSFG
LLVFRHPLADVSAKAAAPLGAAFTFLALLTGSLWGKPMWGTYWVWDARLTSVLILFFLYLGLIALRAALEDESAGAKLTA
ILALVGVTILPIIKFSVNWWNTLHQPSTDFTATVDPSMRWPLLVMALGFTVLFFAMHLKAMRNEIMRRRVKAMRAQVVAG
RDRLAASGVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 7e-34 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HYPDE_39583 YP_007916084.1 heme exporter protein CcmC VFG1856 Protein 2e-26 45