Gene Information

Name : BTI_5290 (BTI_5290)
Accession : YP_007921730.1
Strain :
Genome accession: NC_021174
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor, sigma-70 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2066797 - 2067324 bp
Length : 528 bp
Strand : +
Note : sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein

DNA sequence : 
ATGTCCGCCGCTCAACTTGCCCTCCACCTGGATGTGCAGGCTCTTTATCGCGACCACCACGGCTGGTTGCAGGGATGGTT
GCGCAGGCGGCTGGGTAACGCTTTCGATGCTGCGGACCTTGCCCAGGACGCGTTTCTCCGCCTGATCCTCAAGCCGGCGC
CCAAGGGGTTCGACAGCGACGCCGAGGCACGCGCCTACTTGCGTGCGATGGCACAGGGCATGTGCATCGACCTGTTCCGC
CGCCGTCAGGTCGAGCAGGCGTGGCTCGACGCGCTTGCCGCCCAGCCGGAACCTTGCGAGCCCTCGCCCGAATATCGCGC
GATCGTCATCGAGACGCTGATGGAAGTCGGCGCGCTCATCAGCCGGCTGTCGGATAAAGCGAGGAACGCATTCGTCATGG
CGCAGATCCACGGCCTCTCCACTCGCGAGATTGCTGCCGAGCTCGGCGTTTCCGACCGAATGGTGCAGAAGTATCTCGCC
CAGGCGATGTTGCAGCTCGCGTTGCTCGACGCCGGCATCAAGCACTGA

Protein sequence : 
MSAAQLALHLDVQALYRDHHGWLQGWLRRRLGNAFDAADLAQDAFLRLILKPAPKGFDSDAEARAYLRAMAQGMCIDLFR
RRQVEQAWLDALAAQPEPCEPSPEYRAIVIETLMEVGALISRLSDKARNAFVMAQIHGLSTREIAAELGVSDRMVQKYLA
QAMLQLALLDAGIKH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-20 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTI_5290 YP_007921730.1 RNA polymerase sigma factor, sigma-70 family protein VFG1049 Protein 1e-20 43