Gene Information

Name : I872_08140 (I872_08140)
Accession : YP_007923860.1
Strain : Streptococcus oligofermentans AS 1.3089
Genome accession: NC_021175
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1640836 - 1641603 bp
Length : 768 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACATTATTAGACGTACAACACGTGAAAAAGATTTATAAGACCCGCTTTCAGGGCAGCCAAGTAGAGGCGCTGAAGGA
CATTCACTTTACAGTAGAAAAAGGCGAATATGTCGCCATCATGGGGGAGTCAGGCTCTGGGAAATCCACCCTGCTCAATA
TTCTAGCTATGCTGGACAAGCCGACAGAAGGCCGTGTTTTCCTCAACGGAACTGATACGGCAACCATTAAAAACAGCCAG
GCTTCCAGCTTCCGTCGGGAGAAATTAGGCTTTGTATTTCAGGATTTCAACTTGCTGGATACCTTGTCAGTCAAGGATAA
TATCCTCCTGCCTTTGGTCCTCTCTCGGCGTCCTATTACTGAGATGATGCAAAAGCTGGTCACGACCTGCAATGAGCTGG
GGATTAACAAACTTCAAGAGAAGTTCCCTTATGAAATTTCCGGTGGTCAGAAGCAACGGGTAGCAGTAGCCCGTGCCATT
ATCACCGAGCCTGAGATTCTGCTGGCAGATGAACCAACAGGAGCCTTGGATTCCAAGTCCTCGGCTGCCCTCTTGGATGT
CTTTGACGATATCAACGACCGCGGCCAGACCATTCTCATGGTGACCCACTCGACCTCGGCAGCCAGTCGGGCCAAGCGGG
TGCTCTTTATCAAGGATGGAATTCTTTACAATCAAATCTTCCGCGGTGACAAGACCGAGCGGCAGATGTTCCAAGAGATT
TCTGATACGCTGACGGTCATGGCAAGTGAGGTAGAAGCTCATGCTTAG

Protein sequence : 
MTLLDVQHVKKIYKTRFQGSQVEALKDIHFTVEKGEYVAIMGESGSGKSTLLNILAMLDKPTEGRVFLNGTDTATIKNSQ
ASSFRREKLGFVFQDFNLLDTLSVKDNILLPLVLSRRPITEMMQKLVTTCNELGINKLQEKFPYEISGGQKQRVAVARAI
ITEPEILLADEPTGALDSKSSAALLDVFDDINDRGQTILMVTHSTSAASRAKRVLFIKDGILYNQIFRGDKTERQMFQEI
SDTLTVMASEVEAHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I872_08140 YP_007923860.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-42 46
I872_08140 YP_007923860.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 4e-39 43
I872_08140 YP_007923860.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 3e-36 42
I872_08140 YP_007923860.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-38 41