Gene Information

Name : I872_08195 (I872_08195)
Accession : YP_007923871.1
Strain : Streptococcus oligofermentans AS 1.3089
Genome accession: NC_021175
Putative virulence/resistance : Resistance
Product : antibiotic ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1656091 - 1656870 bp
Length : 780 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACCTTATTAGATGTACAACACGTGAAAAAGATTTATAAAACCCGTTTTCAGGGCAGTCAAGTAGAGGCGCTGAAGGA
CATTCACTTTACAGTGGAGAAAGGCGAATATGTGGCCATCATGGGAGAATCAGGCTCTGGGAAGTCCACCCTGCTCAATA
TCCTAGCCATGTTGGACAAGCCGACTGAGGGCCGCGTCTTTCTCAACGGAACTGACACAGCAACCATCAAGAACAGTCAG
GCTTCCAGCTTTCGCCGAGAGAAATTAGGCTTTGTATTTCAGGATTTTAATCTGTTAGATACCCTGTCGGTCAAGGATAA
TATCCTCCTGCCTTTGGTGCTCTCGCGTCGTCCTATTACTGAGATGATGCAAAAGCTGGTGACGACCTGCAATGAGCTGG
GGATTAACAAACTTCAAGAGAAGTTCCCTTATGAAATTTCTGGTGGTCAGAAGCAACGGGTTGCAGTAGCCCGTGCCATC
ATCACAGAGCCTGAGATTTTGCTGGCGGATGAGCCGACAGGAGCTTTGGATTCCAAGTCTTCAGCTGCTCTTTTGGATGT
CTTTGACGATATCAATGACCGCGGCCAGACCATTCTCATGGTGACCCACTCGACTTCAGCTGCCAGTCGGGCCAAGCGGG
TGCTATTTATCAAGGACGGGATTCTTTATAACCAAATCTTTCGCGGCAACAAGACCGAGCGGCAGATGTTCCAAGAAATT
TCCGATACTCTGACAGTCATGGCAAGTGAGGTGGGCGATTATGTTCAAACTAACGAGTAA

Protein sequence : 
MTLLDVQHVKKIYKTRFQGSQVEALKDIHFTVEKGEYVAIMGESGSGKSTLLNILAMLDKPTEGRVFLNGTDTATIKNSQ
ASSFRREKLGFVFQDFNLLDTLSVKDNILLPLVLSRRPITEMMQKLVTTCNELGINKLQEKFPYEISGGQKQRVAVARAI
ITEPEILLADEPTGALDSKSSAALLDVFDDINDRGQTILMVTHSTSAASRAKRVLFIKDGILYNQIFRGNKTERQMFQEI
SDTLTVMASEVGDYVQTNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I872_08195 YP_007923871.1 antibiotic ABC transporter ATPase CP001581.1.gene798.p Protein 1e-42 46
I872_08195 YP_007923871.1 antibiotic ABC transporter ATPase NC_012469.1.7686878. Protein 5e-39 43
I872_08195 YP_007923871.1 antibiotic ABC transporter ATPase CP001581.1.gene598.p Protein 3e-36 42
I872_08195 YP_007923871.1 antibiotic ABC transporter ATPase NC_008702.1.4606598. Protein 1e-38 41