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Name : secD (TY21A_12460) Accession : YP_007926753.1 Strain : Salmonella enterica Ty21a Genome accession: NC_021176 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2524717 - 2526531 bp Length : 1815 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : ATGCTGGTCGTCGTGATTATCGTCGGCCTGCTTTACGCACTTCCCAACCTGTATGGTGAGGATCCGGCTGTTCAAATCAC TGGCGTGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATTCCCGCTA AGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACACCACCGATACCCAGCTACGCGCCCGTGAAGCGCTG ATGAGCGTGCTGGGGGATAAATATGTCGTGGCGCTTAACCTTGCGCCGGCTACGCCGCGCTGGTTGGCGGCTATTCACGC CGATCCGATGAAGCTCGGTCTTGATCTGCGCGGCGGCGTTCACTTCCTGATGGAAGTGGATATGGATACCGCGTTAGGTA AACTCCAGGAACAAAATATCGATAGCCTGCGCAGCGATCTGCGTGAAAAAGGCATTCCTTATACCACCGTTCGTAAAGAA AATAATTATGGGCTGAGCATCACGTTCCGTGACAGCAAAGCGCGTGATGAGGCGATCGCCTATCTGACGCCGCGTCATCG TGACCTGGTGATTTCCAGCCAGAGCGGCAATCAACTTCGCGCGGTAATGACCGATGCGCGCCTGAGCGAAGCGCGTGAAT ACGCCGTTCAGCAGAACATTAATATTCTGCGTAACCGTGTTAACCAACTGGGCGTCGCGGAGCCTGTCGTACAACGCCAG GGCGCAGACCGTATTGTGGTTGAGCTGCCGGGTATCCAGGATACCGCTCGCGCGAAAGAAATTCTCGGCGCGACCGCGAC GCTGGAATTCCGTCTGGTGAATACCAACGTTGACCAGGCCGCCGCTGCTGCCGGGCGCGTACCGGGCGATTCCGAAGTGA AACAGACCCGCGAAGGTCAGCCGGTGGTATTGTACAAACGCGTGATCCTCACCGGCGACCATATCACCGACTCGACGTCC AGCCAGGATGAATATAACCAACCGCAGGTTAACATCTCGCTGGATAGCGCAGGCGGCAATATCATGTCTAACTTCACTAA GGACAATATCGGCAAACCGATGGCGACCCTGTTTGTGGAGTATAAAGACAGCGGTAAGAAAGACGCTAACGGTCGCGCCG TACTGGTGAAACAGGAAGAGGTGATTAACATTGCCAACATCCAGTCTCGGCTGGGTAACAGCTTCCGTATTACCGGTATC AGCAACCCGAACGAAGCGCGTCAGCTCTCGTTGTTGCTGCGTGCGGGTGCCCTGATTGCGCCGATTCAGATCGTTGAAGA GCGCACCATTGGCCCGACTCTGGGTATGCAGAACATCAAGCAGGGCCTGGAAGCCTGTCTGGCCGGTCTGGTGGTCTCCA TCCTGTTCATGATCTTCTTCTATAAGAAGTTTGGTCTGATTGCGACCAGCGCGTTAGTGGCTAACCTGGTGTTGATTGTC GGTATCATGTCGCTGTTGCCGGGGGCAACGCTCAGTATGCCGGGGATTGCGGGTATCGTGTTAACCCTTGCGGTGGCGGT CGACGCCAACGTTCTGATTAACGAACGTATCAAAGAAGAGTTGAGTAATGGCCGCACGGTACAGCAGGCGATAAACGAAG GCTATGCCGGCGCGTTCAGTTCCATCTTCGATGCGAACATCACGACGCTGATTAAAGTCATCATTCTGTATGCTGTCGGT ACCGGGGCAATTAAAGGGTTCGCGATTACGACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTATCGGTACGCG TGCTATCGTAAACCTGCTATATGGCGGCAAGCGCGTCACTAAGCTGTCAATCTGA Protein sequence : MLVVVIIVGLLYALPNLYGEDPAVQITGVRGVAASEQTLIQVQKTLQEEKIPAKSVALEEGAILARFDTTDTQLRAREAL MSVLGDKYVVALNLAPATPRWLAAIHADPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKE NNYGLSITFRDSKARDEAIAYLTPRHRDLVISSQSGNQLRAVMTDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAAAGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTS SQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGI SNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYKKFGLIATSALVANLVLIV GIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAINEGYAGAFSSIFDANITTLIKVIILYAVG TGAIKGFAITTGIGVATSMFTAIIGTRAIVNLLYGGKRVTKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-117 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-118 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-117 | 47 |
