Gene Information

Name : TY21A_12940 (TY21A_12940)
Accession : YP_007926843.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : putative fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2628013 - 2628588 bp
Length : 576 bp
Strand : -
Note : -

DNA sequence : 
ATGTATACCGAGTGTACATATATCACTGTAATAAACAACAAAGCAAGGTTATTTTTTATGAACATGAAAACATCTTTTAT
TGCCGCAGCTGTGGCATTGGCCACCGTTTATTCTTTTTCTGTTTCTGCGGTTCAGAAGGATATTACCGTCACTGCCAATA
TTGACAGTACACTTGAACTGCTGCAGGCCGATGGTTCATCCCTCCCGTCGACTATGAAGCTGGATTTCATGCCGGGTAAG
GGCCTGGTCCATAAATCACTCCAGACCCGCCTTTACAGCAACGATCAGACCAAGTCGGTTAATGTAAAACTGTTGAATGC
TCCACAACTTATCAACGTCCTGGATCCCACCAAAACCATTGATATGGAAGTGACTCTGGGAGGACGGTCACTGACCACCA
CCAATTCTGTACTGGAAGCTAAAACCCTGTTCCCGGACGGAAAAACTGGCGATGCTTCAGCTCTGCTGAACCTGGATATT
GGTCAGAAGGCTGGAGCAGCCTTACAAAACCTGCCTGCCGGTGAATACAGCGGATTGGTCAGTCTGGTGATTTCACAGGC
TGTCACTGCCGGCTAA

Protein sequence : 
MYTECTYITVINNKARLFFMNMKTSFIAAAVALATVYSFSVSAVQKDITVTANIDSTLELLQADGSSLPSTMKLDFMPGK
GLVHKSLQTRLYSNDQTKSVNVKLLNAPQLINVLDPTKTIDMEVTLGGRSLTTTNSVLEAKTLFPDGKTGDASALLNLDI
GQKAGAALQNLPAGEYSGLVSLVISQAVTAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcfB NP_454913.1 putative fimbrial subunit Not tested SPI-6 Protein 1e-83 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_12940 YP_007926843.1 putative fimbrial subunit VFG1435 Protein 3e-21 41