Gene Information

Name : TY21A_12960 (TY21A_12960)
Accession : YP_007926847.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Unknown
Product : LysR-family transcriptional regulator SinR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2631487 - 2632431 bp
Length : 945 bp
Strand : -
Note : COG0583 Transcriptional regulator

DNA sequence :
ATGGAACTGATCAATAATCGTGGTATGCGAGATTGGATGATATTTATTAAAGTGGCGGAAGTAGGGAATCTTTCCCGGGC
TGCGCGGGAATTAGATATTAGCATTTCTGCTGTCAGTAAATCGCTTAGTCGCCTTGAGAATTCTATTGAGGTTACTTTAC
TTCGGCGCGATTCACATCACTTAGAGCTGACTGGAGCTGGTCAGACAGCCTATGCAAGCATGAAAAGGATAACATCTTCC
TTTCAGTCCTTGCTGGATGAATTGCGAAATCCGGATAAAATTATCAGAGGGAGTATAAAATTTTCGGCTCCGGCTATTGT
CTGTGAGTTTCTTGCCAATAAGTGGATATGGGAATTTACAGCTAGCTATCCGGATACAAAAATCTACCTGGATTCACGAG
AGCGTAGCGATTTTTTTAGTAAATCCCTGGAGTTTGATGAGCTGGTTTTTAAAAGTGGCATAATCGAAAGTGAGGATCTC
GTGTATCGAAAGATAAGCCCTTTAAAGTTGGTTCTTTGTGCAAGTCCGAAATATATCAGAAAATATGGCAGGATCTCACA
TCCTGGCGATTTGGAAAATCACATTATTGTGGGTCTTCACAACCATGGTCTTTCCGGACCTCTTACTCTTTTCCGTCAAG
AGGAATCATACACTATTAGTGGCGCTGTTAATGTTCATTTATCTTCCAATAATCTTTTGAGTGTTCTTAATTTGGTTTTA
GAAGGGAAGGGTATCAACCTCATGACTCCGGCCTGGCTTGCCACTAAATACTTAAAAAATAATGAACTTGAAATTATACT
TCCTGAATGGAGAGTTCCAGATCTCCCCATTTATCTTGTATGGCGTCATCGTCAGTATTATTCTCCTTTATTTCAACGCT
TTCTGTCTTTTATTGAAGATAAATGGAATAATCGCCCACAAATTGATTTTCTGAATGATGATTAA

Protein sequence :
MELINNRGMRDWMIFIKVAEVGNLSRAARELDISISAVSKSLSRLENSIEVTLLRRDSHHLELTGAGQTAYASMKRITSS
FQSLLDELRNPDKIIRGSIKFSAPAIVCEFLANKWIWEFTASYPDTKIYLDSRERSDFFSKSLEFDELVFKSGIIESEDL
VYRKISPLKLVLCASPKYIRKYGRISHPGDLENHIIVGLHNHGLSGPLTLFRQEESYTISGAVNVHLSSNNLLSVLNLVL
EGKGINLMTPAWLATKYLKNNELEIILPEWRVPDLPIYLVWRHRQYYSPLFQRFLSFIEDKWNNRPQIDFLNDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sinR NP_454910.1 LysR-family transcriptional regulator SinR Not tested SPI-6 Protein 1e-134 100