Gene Information

Name : TY21A_04245 (TY21A_04245)
Accession : YP_007925173.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : propanediol utilization protein PduA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 930221 - 930484 bp
Length : 264 bp
Strand : -
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGGTAGAAACCAAAGGCTTAACCGCAGTCATAGAGGCCGCTGATGCAATGGTTAAGTCAGCCAATGTGATGTTAGTGGG
CTATGAAAAGATTGGCTCCGGGCTGGTAACCGTCATCGTGCGCGGCGATGTTGGCGCGGTCAAAGCGGCCACCGATGCAG
GTGCCGCAGCCGCACGCAACGTGGGTGAAGTGAAAGCCGTACACGTCATCCCACGCCCTCACACCGATGTAGAAAAAATC
TTACCGAAGGGAATTAGCCAATGA

Protein sequence : 
MVETKGLTAVIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKI
LPKGISQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-10 64
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-11 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-10 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_04245 YP_007925173.1 propanediol utilization protein PduA VFG1596 Protein 2e-11 64
TY21A_04245 YP_007925173.1 propanediol utilization protein PduA VFG1598 Protein 8e-11 64
TY21A_04245 YP_007925173.1 propanediol utilization protein PduA VFG1597 Protein 1e-10 63