|
Name : Clopa_3006 (Clopa_3006) Accession : YP_007941511.1 Strain : Clostridium pasteurianum BC1 Genome accession: NC_021182 Putative virulence/resistance : Unknown Product : DNA-binding regulatory protein, YebC/PmpR family Function : - COG functional category : - COG ID : - EC number : - Position : 2987763 - 2988500 bp Length : 738 bp Strand : - Note : PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family DNA sequence : ATGTCAGGACATTCAAAGTGGCATAATATTCAAGCAAAAAAAGGTAAAGCAGATGCTCAAAGAGGAAAAGTGTTTACAAA AATAGGAAAAGAAATAGCTGTGGCAGCTAAAGATGGTTCTAATCCAGATACTAATGCAAAATTAAGAGATGTTGTAGCTA AAGCAAAGGCTAATAATATGCCTTTAGATACAATTACAAGGGCAATAAAGAAGGGAGCAGGTGAACTTGAAGGAGTAAAC TATGAAGAAATAGTTTATGAAGGCTATGGTCCTGCTGGAGTTGCAGTTATAGTTGATGTTTTAACAGATAATAAAAACAG AAGTGCAAGTAATGTAAGATATATATTTGACAGAAATGGTGGTAATTTAGGGGCGAATGGATGTGTGTCATTCATGTTCC AAAGAAAAGGCCAAATAATTATCGAGAAAAAAGATGGACTAGATGAAGATGAAGTTATGATGGCAGCACTAGATGCTGGA GCAGAGGACTTTAATCCAGAAGAAGAAGCATTTGAAATAACTACCGCTATGGAGGATTTTTCTGTGGTTAGGGAGGCTCT TGAAACTGCAGGTTATGAATTTGCTTCAGCTGAGCTTACTATGATTCCAGACACATATACTGAACTTAATTTAGAAGATG CTGAAAAGGTTCAAAGTCTTATAGACAAACTTGAAGATGATGACGATGTGCAAGATGTGTACTCAAATGCACAGTTCCCT GATGAATTTGAAGGATAG Protein sequence : MSGHSKWHNIQAKKGKADAQRGKVFTKIGKEIAVAAKDGSNPDTNAKLRDVVAKAKANNMPLDTITRAIKKGAGELEGVN YEEIVYEGYGPAGVAVIVDVLTDNKNRSASNVRYIFDRNGGNLGANGCVSFMFQRKGQIIIEKKDGLDEDEVMMAALDAG AEDFNPEEEAFEITTAMEDFSVVREALETAGYEFASAELTMIPDTYTELNLEDAEKVQSLIDKLEDDDDVQDVYSNAQFP DEFEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1069 | YP_853086.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 2e-28 | 42 |
