Gene Information

Name : Clopa_3888 (Clopa_3888)
Accession : YP_007942316.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : cold shock protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3900019 - 3900216 bp
Length : 198 bp
Strand : -
Note : PFAM: 'Cold-shock' DNA-binding domain

DNA sequence :
ATGAATGGTACAGTAAAATGGTTTAATGCTCAAAAAGGTTTTGGTTTTATTACAGGAGAAGATGGAAAAGATGTTTTTGC
ACACTTTTCACAAATAAAAGCAGAAGGTTATAAATCACTTGAAGAAGGTCAAAAAGTTGTTTATGATGTAGTTGAAGGAC
CAAAAGGCCCTCAAGCTGAAAATATCACTATTGCTTAA

Protein sequence :
MNGTVKWFNAQKGFGFITGEDGKDVFAHFSQIKAEGYKSLEEGQKVVYDVVEGPKGPQAENITIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-14 54