Gene Information

Name : Clopa_4424 (Clopa_4424)
Accession : YP_007942813.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4497720 - 4498412 bp
Length : 693 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGATTGAGGTTACAAATATAGTTAAAAAATATGTAACTGGAGAAATAGATTTTACTGCACTAAAAGGAGTTAATTTAAA
GATTGAAAAGGGAGAATTCACTTCAATTATGGGACCTTCCGGTTCGGGAAAATCTACCTTCATGAATATATTAGGATGTC
TTGATAAAATGGACAGCGGCATATATATGCTAAACGGAAAGGATGTTTCCAATTTAACTGGTAATGAATTAGCTCTTGTG
CGAAACAAAGAAATAGGTTTTGTATTTCAAGCTTTTAATCTATTGCCTAGACTTACTATATTGGATAACGTTGCTTTGCC
TATGGTATATGCAGGTGTTTCAGCTAAGGAACGAAAAGAAAGAGCACTAGAAGCACTGGTAAAGGTGGGACTGGGAGATA
GGGTCAAACATAGACCTAATGAAATTTCTGGCGGACAAAAGCAGAGAGTTGCAATTGCAAGGGCCATAGTGAATAGGCCT
AATGTTATTATGGCAGATGAGCCAACAGGAAACTTAGATACAAAATCTACTTTTGAAATAATGAAAATTTTCCAGGATCT
AAATGATGAAGGTTCTACAGTTGTTATGGTAACTCACGAACCTGATGTTGCCGTATATACCAAGAGAATTGTAAGATTTA
AGGATGGAGAAATAACATCTGATGAAGAGGTAAAGGATAGAACAAGACTATAA

Protein sequence : 
MIEVTNIVKKYVTGEIDFTALKGVNLKIEKGEFTSIMGPSGSGKSTFMNILGCLDKMDSGIYMLNGKDVSNLTGNELALV
RNKEIGFVFQAFNLLPRLTILDNVALPMVYAGVSAKERKERALEALVKVGLGDRVKHRPNEISGGQKQRVAIARAIVNRP
NVIMADEPTGNLDTKSTFEIMKIFQDLNDEGSTVVMVTHEPDVAVYTKRIVRFKDGEITSDEEVKDRTRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-33 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clopa_4424 YP_007942813.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 1e-57 55
Clopa_4424 YP_007942813.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 3e-47 48
Clopa_4424 YP_007942813.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-38 42
Clopa_4424 YP_007942813.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 1e-37 41