Gene Information

Name : Clopa_0626 (Clopa_0626)
Accession : YP_007939349.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 631512 - 632198 bp
Length : 687 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGTCAATAATTCAGGCTAACAATGTAACAAAGGATTTTTATTTAAATAAAATAAAAGTCAATATATTAAAAGGTATAAG
CATAAGCATAGAAGAAGGTGAATTTGCAGTTATTATAGGAGAATCCGGCTCAGGTAAGTCAACTTTTTTAAATATACTGG
CAGGACTTATGCCTCCAACAATGGGAGATGTAAATATCTGCAATGAAAATATATCTAAGTTTAATGAAAATCAATTGGCT
TTATTCAGAAGAAAGCATTTAGGTTTTGTATTTCAAGCTTATAATTTGCTGCCTCAATTTACAGCTCTAGAAAATGTTGC
ATTTCCACTTGTGTTTTTAGGGATATCAAAAAAAGAGAGGAAGGAAAGAGCAGCAGAAATGCTAAAAAAGGTCGGTCTTG
AAGAGAGGATGAACCATAAACCAAGCGAGCTTTCAGGGGGTCAGCAGCAAAGAGTATCTATAGCAAGAGCACTGGTAAAT
AATTCAGCTGTTGTACTTGCCGATGAACCTACGGGGAATTTGGATAGTAAAACTGGTGTAGAAATTATAGAAATGCTAAA
AGAACTAAACGAAAAGGAAAATAAAACCTTCGTAGTAGTAACTCATTCACAGCAGGTATGCAAATATGCAGATAAAATTA
TAAGAGTTAAAGATGGTCTTATTGTAGATGAAAACAATTATAATTAA

Protein sequence : 
MSIIQANNVTKDFYLNKIKVNILKGISISIEEGEFAVIIGESGSGKSTFLNILAGLMPPTMGDVNICNENISKFNENQLA
LFRRKHLGFVFQAYNLLPQFTALENVAFPLVFLGISKKERKERAAEMLKKVGLEERMNHKPSELSGGQQQRVSIARALVN
NSAVVLADEPTGNLDSKTGVEIIEMLKELNEKENKTFVVVTHSQQVCKYADKIIRVKDGLIVDENNYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clopa_0626 YP_007939349.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 1e-40 47
Clopa_0626 YP_007939349.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 1e-40 44
Clopa_0626 YP_007939349.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 6e-38 44
Clopa_0626 YP_007939349.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 2e-35 41