Gene Information

Name : Clopa_0951 (Clopa_0951)
Accession : YP_007939644.1
Strain : Clostridium pasteurianum BC1
Genome accession: NC_021182
Putative virulence/resistance : Unknown
Product : transketolase, alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 976583 - 977536 bp
Length : 954 bp
Strand : +
Note : PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain

DNA sequence :
ATGTATGAAGATGTGGAAGTAAGACAGGTACTTGGAAATACTTTGGATAAAATAATGGAGAAGGATGATAGGATAGTAGT
ATTAGATGCAGATTTAGCCAAAGCTAACGGAACTATTTCGCTGAGAGAAAAGTATCCTGAAAGAGCCTTTGATATTGGTA
TAGCAGAGCAGAATATGACTTCAGTAGCTGCTGGCATGGCAGCTTACGGAATGATTCCCTTTATAGGTACATTTACTCCT
TTTGCCAGCAGGAGAATATGTGATCAGATAACAATATCAGTTTGCTATGCAAATAGAAATGTAAAAATACTTGGAACAGA
CCCGGGGATTGCAGCAGAACTAAATGGTGGTACACACATGAGTTTTGAGGATATTGGAGTTTTGAGAAGTATTCCCAATA
TAGTAATTTATGAAGTAGTAGATGCTGTTCAGCTTGAAAAAGCATTACCTAAAATAATTAATTATGAGGGACCTGTATAT
ATAAGAATGTTTAGAAAAGTTGCTCCTGTAGTATTTGATGAAAACTATGAATTTGATCTATTTAAAGCAGATCTAATTAA
AGAAGGAGCAGATGTAAGTATCTTTGCCACAGGAATAATGGTGAAGGAAGCTATTGAAGCAGAAAAAATATTAAGACAGG
AAAATATAAATGCTGAAGTAATAAATATACACACCATTAAGCCAATAGACAGAGAAGCTGTAATAAAATCTGCACAAAAG
ACAGGGGCAGTAGTAACCTGTGAAAATCACAATATAATTGGAGGACTTAGAAGTGCCGTAGCGGAGGTATTAATAGAAGA
AAATCCTGTACCTGTTAAGACAATAGGAATAAAAGATCATTTTGGAGAGGTTGGCTTTACTCCTTATCTATTAGAAAAGT
ATGGAATGACAAAAGAACATATAGTTAAGGCGGCAAAAGAAGTTATAAGTAAAAAATCTGGTTGTATGGTCTAA

Protein sequence :
MYEDVEVRQVLGNTLDKIMEKDDRIVVLDADLAKANGTISLREKYPERAFDIGIAEQNMTSVAAGMAAYGMIPFIGTFTP
FASRRICDQITISVCYANRNVKILGTDPGIAAELNGGTHMSFEDIGVLRSIPNIVIYEVVDAVQLEKALPKIINYEGPVY
IRMFRKVAPVVFDENYEFDLFKADLIKEGADVSIFATGIMVKEAIEAEKILRQENINAEVINIHTIKPIDREAVIKSAQK
TGAVVTCENHNIIGGLRSAVAEVLIEENPVPVKTIGIKDHFGEVGFTPYLLEKYGMTKEHIVKAAKEVISKKSGCMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 3e-38 41